Gene Smal_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1491 
Symbol 
ID6475356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1680479 
End bp1681501 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID642730669 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_002027879 
Protein GI194365269 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.369724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC ATCCATTGCG TGCGGCCGAC GATGAGATCG CCCGTGAGGC CGAGGACTGG 
TTCCTGCGCA ATCGAGAGGG GAGTATGGGC GAGGCCGAGC GCGCTGCGTT CCTGCACTGG
ATGAAGCGTT CGCCCGAACA CGTGCGCGCC TATATGCACG CTCTCACGCT GCACCGGCAG
GTCGGTGCAG CGCTGCAATC GCCATTGCCT GAAGAGGCGC AGGCGCCGCC ACGGCAGGCG
GCCGCCAAGG TGGTGCCGCT GTTCGGTAGC GCACCCGCCG CGTCGCGCGC TGCACCGCGT
CGCGGCCGCG CGCGCTGGTG GGCGGTGGCT GCCGCAGCCT GTGTCGCCCT GCTCGGCGTG
GGCCTGGTTC CGCAGTTGAT GCCCACCGAA CAGCTGTACA GCGCCGACCA TGGTGAACTG
CGCGACCTGG TGCTGCCTGA CCAGACCCAG GTGCGGCTCA ACGCGGACAG CCGCCTGCGG
GTACGCATGA GCTGGTTCAT CCGCAAAGTG GAGCTGCTGC AGGGCGAGGC CACGTTCGAC
ATCGCCCGCG ACCGCCGTCC GTTCGAAGTG CAGGTGAACG GGCTGCAGAT CCGTGACATC
GGCACCGTAT TCGACGTCTC GCGACGCCTG CAGGGCACGC GCATCGGCGT GGTCTCCGGC
GAAGTGGAGG TGTGGAGCCA GGGCAGGGAT GCAACGCGTC TTGCGCAGCT GGGCGAAGGC
CGGGTGGTGC AGGTCGACGC GCGCAGCCAT GCGGTGGAGT CGCTGGATGT ACCGCTGTCG
ATGCTGCTGG ACTGGCAGCA GCGCAAGGTG TCCTTCCTTG ATGAGCGGCT GGATGAGGTG
GCTGCCGCCT TCAACCGTCA CAACCAGGTG CAGGTGCGCG TGCTGGACGA GGGTGCGGCA
GCGGCACGGC TTTCCGGCAG CCTGGATGCA CATCGCATTG GGGCTCTGCA GGCGTTCCTC
GAACGCGATC CGCGCTTCGT CGTCCGCCGC GAGGGCGACA CGATGCGGGT CGGCAGCCGC
TGA
 
Protein sequence
MNWHPLRAAD DEIAREAEDW FLRNREGSMG EAERAAFLHW MKRSPEHVRA YMHALTLHRQ 
VGAALQSPLP EEAQAPPRQA AAKVVPLFGS APAASRAAPR RGRARWWAVA AAACVALLGV
GLVPQLMPTE QLYSADHGEL RDLVLPDQTQ VRLNADSRLR VRMSWFIRKV ELLQGEATFD
IARDRRPFEV QVNGLQIRDI GTVFDVSRRL QGTRIGVVSG EVEVWSQGRD ATRLAQLGEG
RVVQVDARSH AVESLDVPLS MLLDWQQRKV SFLDERLDEV AAAFNRHNQV QVRVLDEGAA
AARLSGSLDA HRIGALQAFL ERDPRFVVRR EGDTMRVGSR