Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1485 |
Symbol | |
ID | 6475350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1673505 |
End bp | 1674662 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730663 |
Product | ROK family protein |
Protein accession | YP_002027873 |
Protein GI | 194365263 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.177239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.920593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGG CCCCCACATC GCGGCTGCGC CGCAAACCGC TGATCGCGCT GGATGCCGAC CACAAGCGCA TCATCTGGCT GTTGCGCACG ATGGGCGCCG TTCCCCGCAT CACCATTGCC CACCAGCTGG GCATGCACAA CGGCGCGTTG ACCCGCCTGG CGCGTGAACT GCTGATGCTG GAGGTGATCG AGGAACAGGG GCAACTGTCC GATGGCCAGC GCGGCCGACC CTCGGTGCCA CTGGCGCTGT CCGGGCGGGG CGGCTATGCC GCCGGTGCCA CGGTACATCC CGGTTGGCTG GAGATCGCGC TGGTGGATTT TGCCGGCCAG CTCATCGCCC GCGATGCAAC CGCATTCGAC AGCGCAGATC CCTACGACTT CGTGCACGCA GTGGACCAGC GCCTGCGCAG CCTTACCAGC CGCACTGGGC TCATGCGCGC GCGCTTCCTG GGCCTCGGCG TGGCGGTTCC CGGGCCCGTG GTCGAAACCG GGCCGGCGCG CAGGCACGCG GTGGACTGGC TGCACGGTTG GCGCGATATC GACAACGACC AGTTCTTCGA AGACTACTTC GGTTTCCCGG TCTGGGTGGA GAACGATGCG ACCCTGGCGG CGCTGGCGGA GTACTACGAC AGCGGACTGA TCCGGGACTG CGCCTCGGCG CTGCTGCTGT ATGTCGGCCA CGGCGTGGGC GGCGGCGTGA TCCATCGGCG CGACGTGATG CGCGGTGAGT TCGGCAATGC CGGGGATATC GGTCGCTTGT TCCGCATGGA CGCACCGCGT CCCTCGGGCA TCGACCTGCT GGCCACGTTG CGCGAGGCCG GCGCCGGCAT TCCCTCACTG TTCGAACTGG AGTCCTGCCT GGAAACCCAT GCCGGCATCA TCAGCGCCTG GGCCGAACGC GCGGGGAACC AGTTGGGCGC GGCCGCCAAT ACCGGTGTGG CGTGGCTCGA TCCTGGCGCC GTGATCCTGT CCGGCTCACT GCCGAGGCAG GTGCTGGAAG TGTTGGGGCA ACACCTGCAG CAGCCTGCAC GCTGGAGCAG TGCGCTGGAC AGCCTGCGCC TGCCGCAGGT GCATGTGTCG CGGCTGGGAG GGTCTGCGGT ATCGGTGGGC GCGGCCCTGC TGCCGATCCA CCAGCTGGGT GCCGATGCCG CCGCTTAA
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Protein sequence | MNLAPTSRLR RKPLIALDAD HKRIIWLLRT MGAVPRITIA HQLGMHNGAL TRLARELLML EVIEEQGQLS DGQRGRPSVP LALSGRGGYA AGATVHPGWL EIALVDFAGQ LIARDATAFD SADPYDFVHA VDQRLRSLTS RTGLMRARFL GLGVAVPGPV VETGPARRHA VDWLHGWRDI DNDQFFEDYF GFPVWVENDA TLAALAEYYD SGLIRDCASA LLLYVGHGVG GGVIHRRDVM RGEFGNAGDI GRLFRMDAPR PSGIDLLATL REAGAGIPSL FELESCLETH AGIISAWAER AGNQLGAAAN TGVAWLDPGA VILSGSLPRQ VLEVLGQHLQ QPARWSSALD SLRLPQVHVS RLGGSAVSVG AALLPIHQLG ADAAA
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