Gene Smal_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1485 
Symbol 
ID6475350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1673505 
End bp1674662 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content68% 
IMG OID642730663 
ProductROK family protein 
Protein accessionYP_002027873 
Protein GI194365263 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.177239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.920593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGG CCCCCACATC GCGGCTGCGC CGCAAACCGC TGATCGCGCT GGATGCCGAC 
CACAAGCGCA TCATCTGGCT GTTGCGCACG ATGGGCGCCG TTCCCCGCAT CACCATTGCC
CACCAGCTGG GCATGCACAA CGGCGCGTTG ACCCGCCTGG CGCGTGAACT GCTGATGCTG
GAGGTGATCG AGGAACAGGG GCAACTGTCC GATGGCCAGC GCGGCCGACC CTCGGTGCCA
CTGGCGCTGT CCGGGCGGGG CGGCTATGCC GCCGGTGCCA CGGTACATCC CGGTTGGCTG
GAGATCGCGC TGGTGGATTT TGCCGGCCAG CTCATCGCCC GCGATGCAAC CGCATTCGAC
AGCGCAGATC CCTACGACTT CGTGCACGCA GTGGACCAGC GCCTGCGCAG CCTTACCAGC
CGCACTGGGC TCATGCGCGC GCGCTTCCTG GGCCTCGGCG TGGCGGTTCC CGGGCCCGTG
GTCGAAACCG GGCCGGCGCG CAGGCACGCG GTGGACTGGC TGCACGGTTG GCGCGATATC
GACAACGACC AGTTCTTCGA AGACTACTTC GGTTTCCCGG TCTGGGTGGA GAACGATGCG
ACCCTGGCGG CGCTGGCGGA GTACTACGAC AGCGGACTGA TCCGGGACTG CGCCTCGGCG
CTGCTGCTGT ATGTCGGCCA CGGCGTGGGC GGCGGCGTGA TCCATCGGCG CGACGTGATG
CGCGGTGAGT TCGGCAATGC CGGGGATATC GGTCGCTTGT TCCGCATGGA CGCACCGCGT
CCCTCGGGCA TCGACCTGCT GGCCACGTTG CGCGAGGCCG GCGCCGGCAT TCCCTCACTG
TTCGAACTGG AGTCCTGCCT GGAAACCCAT GCCGGCATCA TCAGCGCCTG GGCCGAACGC
GCGGGGAACC AGTTGGGCGC GGCCGCCAAT ACCGGTGTGG CGTGGCTCGA TCCTGGCGCC
GTGATCCTGT CCGGCTCACT GCCGAGGCAG GTGCTGGAAG TGTTGGGGCA ACACCTGCAG
CAGCCTGCAC GCTGGAGCAG TGCGCTGGAC AGCCTGCGCC TGCCGCAGGT GCATGTGTCG
CGGCTGGGAG GGTCTGCGGT ATCGGTGGGC GCGGCCCTGC TGCCGATCCA CCAGCTGGGT
GCCGATGCCG CCGCTTAA
 
Protein sequence
MNLAPTSRLR RKPLIALDAD HKRIIWLLRT MGAVPRITIA HQLGMHNGAL TRLARELLML 
EVIEEQGQLS DGQRGRPSVP LALSGRGGYA AGATVHPGWL EIALVDFAGQ LIARDATAFD
SADPYDFVHA VDQRLRSLTS RTGLMRARFL GLGVAVPGPV VETGPARRHA VDWLHGWRDI
DNDQFFEDYF GFPVWVENDA TLAALAEYYD SGLIRDCASA LLLYVGHGVG GGVIHRRDVM
RGEFGNAGDI GRLFRMDAPR PSGIDLLATL REAGAGIPSL FELESCLETH AGIISAWAER
AGNQLGAAAN TGVAWLDPGA VILSGSLPRQ VLEVLGQHLQ QPARWSSALD SLRLPQVHVS
RLGGSAVSVG AALLPIHQLG ADAAA