| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1301 |
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| Symbol | |
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| ID | 6475156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1485245 |
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| End bp | 1488271 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642730469 |
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| Product | two component regulator propeller domain protein |
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| Protein accession | YP_002027689 |
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| Protein GI | 194365079 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.503431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.30236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGAC AGGGGGACAA CGGGCGCTGG GTGGAGCGCT GTGGCACGGG ATTCGGTCGG
GCGTTGCGGC AGGGCCTGCT GTGGCTGCTG CTGATGCTGT CCCTGCCGGC CGTGGCGCAG
GAGGGCGCAC CGCCGCTGCG CGACTACGCC ATCGATGTAT GGACCTCGCG CAACGGCCTG
CCGCACAACT CGCTGCGCGA CATCGCGCAG ACCCCCGAAG GCCACCTGTG GTTTGCCACC
TGGGAAGGCC TGGTGCGTTA CAACGGCCTG GATTTCACCG TGTTCGACCG CAGTACCCGA
CCGGGACTGC GCGACAACGG CATCGGCGCG CTGCTGGTCG ACCGCCAGGG CGGATTGTGG
ATCAGTGATT CACGCGGCAA CGTCAGCCAT CGCGGCAACG ACGGCCAGTG GCGGGTCTGG
GAGCATCAGG CCGGTACCCC GCAGGTGCTG ATCCAGTCCA TGCAGATGGA CAGCCAGGGG
CGGCTGTGGC TGCTGTACGA GGGCAAGGGC ATCGGCTACC TGGTCGCGGA CAAGGGCATC
GTCTACCAGG CGCCGGCGGC TGACCTGCCG TTGGCGATGA GCTTCACCAA GCTGGTGGTC
GATGCACAGG ACCGGGTCTG GATCGGCACG CTCGACGGGC TGGTGCTGCG CGACAACGAT
GGCGTGCTCA AGCGTGCACC GGCGGCCTGG GGACTGGGCG CCGGCAGTGG CCTGTCATGG
CCGTACCGGG CGCCGGATGG CGCGTTGTGG ATCGTCGCCG GCGAGCGCCT GTACCGCGTG
GAGGACGATC AACTGGTGCT GGTGCATCGC CTGCCGGGTC AGTTGCATCT GACCTCGATG
CTGCAGGACC GCCATGGCGA CCTGTGGCTG GGCACCGAGA ACCAGGGGCT GCTGCGCATC
TCCTCACATG GCCTGGAGCG GTTGCCGGCC GGCCTGAACC TGCCGGGCGG ACGCGTGGTC
AGCCTGCGCG AGGATGCCGA GGGCAGCATC TGGGTCGGTG CCAACGGCGG CTTGTACCGC
TTGCGCGAAA CGCTGTTCAG CAGCTACACC GAGCGCGATG GGCTCAGTGG CGACTACGTG
CGCACTGTGT TCGAGGATCG CGACCGCCAG CTGTGGGTGG GCAGTGCCAG CGGCCTGGAC
CTGCAGGCGG CGGACGGTCG CTTCCGCGCG GTGCCGCTGC ACAACCGCGG TGGCAAGGCA
CCGTCGGTAT TGAGCCTGGC GCAGGGCCCG GACGGCGATC TGTGGGTCGG TACCTTCGGC
GATGGCGTTT ACCGGCTGGG CCGCGATGGT CGCCTGCGCC ACACCTATGC AGCGGCCGAC
GGCATGCCTG GCGGCAACAT CCGTGCGATC AGTGTCGACC CGCAGGGCGT GGTCTGGGCC
GGCACGCAGA AGGGGGTGGT ACGCATCGAC GGCGACCGTG TGCAGGTATC GAGCGTGCCG
GGCATGCCCA GCGGCCTGAT CACCGCGCTC GAGCATGACC ACCAGAGCAA TCTGTGGATC
GGCACCATCG AAGGCATCCG CGTGCTGCGC GGCAACCGCG TGCAGTCGAT CGACCTGGCA
CCGTTGGGGG GAGGCCGCAG CGTGTTCGGT TTCCACCAGC TGGGCGATGC GATGTGGATC
AGCAGCGACC GCGGCCTGTA CCGCTGGCAG CACGGAACGC TGGCGCGGGT CGGGCTGGAG
CAGGGCATGC CGGTGGACGC GGTGTTCCAG CTGGTGCCGG ACCGCCTGGG CAACGTCTGG
ATCAGCAGCA ACCGCGGCGT GCTGCGCACC GACATGGCCA CGCTCAATGC GGTTGCCGAC
GGGCGCGCGC CGCGGGTGGT GGTGGAGCGC TACAACGAGA TTGATGGCAT GGCCAACGCG
CAGGCCAACG GCAGCTCCAG CCCCTCGGCG ATCCTGCGCC AGGACGGCAC GTTCTGGGTG
GTCACCGCTG GTGGCCTGAG TACGGTGGAT CCGCAGCGCC TGCAGCGTTT CCGCGAACGC
CCCTCGCCAC CGGCAGCGAT CGAAAGCGTG CAGGTGGATG GCGCGCCGGT GCACTGGGAA
GGCCCCGAGC GAAATTACAT CCCCGGTGGC CGCCGGCTGG CGGTGAGCTA TGTCGGCCTG
AGCTACCTGA TGTCTGACCG GATCCGCTAC CGCACCCGGC TGGACGGACT GGATGCCGGC
TGGGTCGAGC GTGGCCCACA GCGCAGTGTC GAATTCGTTG GCCTGCCGCC GGGTGATTAC
ACCCTGCACG TGGCGGCGGC GCATCCAGGC GGCAGCTGGG CGCAGCAGGA AGCGGTGTGG
AGCTTCACCG TGGAGCCGTT CTGGTGGCAG CGACGCAGCG TGCAGGCGCT GGGAGGCCTG
TTGCTGCTGG CCGCGCTGGT GGCGCTGTAC CGGTTGCTGT TGCAGCAGCT GAAGGCCAGC
AACCTGCGCC TGGCGCGGCG TGTGGACGAG GCCACTTTCG ACCTGCAGGC CAAGACCGTG
CACCTGCAGG CGCTGAACCA GGAAAAGACC GAGCTGGCCG AACGGTTGGC GCGGCAGGCC
GAGGCCTTCG AGCGCCAGGC GCGCGAAGAC GCACTGACCG GCCTGGCCAA CCGCCGTGCC
TTCGATGAAA CCCTGGCGCG CGACTTTGCC CGTTCGCAGC GCAGTGGCCA TCCGCTGTGC
CTGGTGGTGC TCGACATCGA CCACTTCAAG GACGTCAACG ACCGCCACAG CCACAGCATC
GGCGATGCGG TGCTGGTGCA GGTGGCAACG GTGATCGCCG CCGCCTGTCG TGACTCGGAC
CTGCCGGCGC GTACCGGCGG CGAAGAATTC GCGCTGCTGC TCAACGACAC ACGCCTGGAA
GAAGCCGCGC AGCTGTGCGC ACGCCTGCGC GGCCTGTTCC ACGACCACCC GGATTGGGCC
GGCGTGGACG GCCTGCGCGT GACCTTCAGC GCAGGCCTGG TGGAGCTGGA TGCCGACGAC
CGTACCCCGG CGCTGCTGTA CCAGCGTGCC GACCGTGCGC TCTACCGCGC CAAGAGCGAC
GGCCGCGATC GTACGAGTAT TGGGTGA
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| Protein sequence | MGGQGDNGRW VERCGTGFGR ALRQGLLWLL LMLSLPAVAQ EGAPPLRDYA IDVWTSRNGL
PHNSLRDIAQ TPEGHLWFAT WEGLVRYNGL DFTVFDRSTR PGLRDNGIGA LLVDRQGGLW
ISDSRGNVSH RGNDGQWRVW EHQAGTPQVL IQSMQMDSQG RLWLLYEGKG IGYLVADKGI
VYQAPAADLP LAMSFTKLVV DAQDRVWIGT LDGLVLRDND GVLKRAPAAW GLGAGSGLSW
PYRAPDGALW IVAGERLYRV EDDQLVLVHR LPGQLHLTSM LQDRHGDLWL GTENQGLLRI
SSHGLERLPA GLNLPGGRVV SLREDAEGSI WVGANGGLYR LRETLFSSYT ERDGLSGDYV
RTVFEDRDRQ LWVGSASGLD LQAADGRFRA VPLHNRGGKA PSVLSLAQGP DGDLWVGTFG
DGVYRLGRDG RLRHTYAAAD GMPGGNIRAI SVDPQGVVWA GTQKGVVRID GDRVQVSSVP
GMPSGLITAL EHDHQSNLWI GTIEGIRVLR GNRVQSIDLA PLGGGRSVFG FHQLGDAMWI
SSDRGLYRWQ HGTLARVGLE QGMPVDAVFQ LVPDRLGNVW ISSNRGVLRT DMATLNAVAD
GRAPRVVVER YNEIDGMANA QANGSSSPSA ILRQDGTFWV VTAGGLSTVD PQRLQRFRER
PSPPAAIESV QVDGAPVHWE GPERNYIPGG RRLAVSYVGL SYLMSDRIRY RTRLDGLDAG
WVERGPQRSV EFVGLPPGDY TLHVAAAHPG GSWAQQEAVW SFTVEPFWWQ RRSVQALGGL
LLLAALVALY RLLLQQLKAS NLRLARRVDE ATFDLQAKTV HLQALNQEKT ELAERLARQA
EAFERQARED ALTGLANRRA FDETLARDFA RSQRSGHPLC LVVLDIDHFK DVNDRHSHSI
GDAVLVQVAT VIAAACRDSD LPARTGGEEF ALLLNDTRLE EAAQLCARLR GLFHDHPDWA
GVDGLRVTFS AGLVELDADD RTPALLYQRA DRALYRAKSD GRDRTSIG
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