Gene Smal_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1280 
SymbolasnB 
ID6475132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1456135 
End bp1457826 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content66% 
IMG OID642730445 
Productasparagine synthetase B 
Protein accessionYP_002027668 
Protein GI194365058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.613021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCGA TCTTCGGAAT CTTCGGCCTG CAGGCCGGTG ACGATCTTCC CGCCCTGCGC 
CGCCATGCGC TGGAACTGTC GCAGCGCCAG CGCCACCGTG GCCCGGACTG GAGCGGCGTG
TACCTCGACG AAGGTGCGCT GCTGGTCCAT GAGCGGCTGG CCATCGTCGA CCCGGCCGGT
GGTTCGCAGC CGTTGTTGTC GGCCGATGGC CAGCTGGCGC TGGCGGTCAA CGGCGAGATC
TACAACCACC AGCAGCTGAA GGCCACGTTG ACCACCGCCT ACGACTTCCA GACCGGTTCG
GACTGTGAAG TGATCAACGC GCTGTACCGT CAGGGCGGTA CGCCAGCACA GTGGCTGGAA
CAGCTCAACG GCATCTTCGC CTTCGCCCTG TGGGATCGCG ATGCTGGCCG TGTACTGGTG
GCACGCGATC CGGTCGGCGT GGTGCCGCTG TACTGGGGTC ACGATGCACA TGGCCGGCTG
CGCGTAGCCT CGGAAATGAA GGCACTGGTC GATACCTGTG CCGATGTCGC GCAGTTCCCG
CCGGGCCACT ATTTCGACAG TGCCAGCGGT GAGCTGGTGC GCTACTACCA GCAGCCGTGG
CGGGACTATG GCGACGTGCA GGGCCGCCAG GCCGACCTCG CCGAGCTGCG CCAGGCTTTC
GAACATGCGG TGGAACGCCA GCTGATGAGT GACGTGCCGT ACGGCGTACT GTTGTCCGGC
GGCCTCGATT CGTCGCTGGT GGCGGCGGTG GCCGCGCGCT ATGCGCGCCG CCGCATCGAG
GATGGCGGGC AGACCGAAGC CTGGTGGCCG CGCCTGCATT CGTTCGCGAT CGGCCTGAAG
GGCTCGCCCG ATCTGGCGGC CGGGGCGATC GCTGCCGAGG CACTCGGCAC CGTGCATCAC
GGCTTCGAAT ACACCTTCGA GGAAGGCCTC GATGCGCTGC CGGAGGTGAT CCGCCACATC
GAAACCTATG ACGTCACCAC CATCCGTGCC TCCACGCCGA TGTTCCTGCT GGCGCGGCGG
ATCAAGGCGA TGGGCGTGAA GATGGTGCTC TCCGGCGAAG GCAGCGATGA GATCTTCGGT
GGCTACCTGT ACTTCCACAA GGCGCCGGAT GCACGCGAAT TCCACGACGA GCTGGTACGC
AAGCTCGATG CCCTGCACAA CTACGATTGC CTGCGCGCCA ACAAGTCGAT GATGGCCTGG
GGCGTGGAGC CGCGTGTCCC GTTCCTCGAC CGCGAGTTTC TCGACGTGGC GATGCGCTTC
GATGCCGCGC ACAAGATGGT CGGTGCCGGC TTCGGTGGGC GCCGCATCGA GAAGGCGGTG
CTGCGCGAAG CATTCGAGGG CTACCTGCCG GACAGCATCC TGTGGCGGCA GAAGGAGCAG
TTCAGCGATG GCGTCGGCTA CGGCTGGATC GACGGGCTGA AGGCGCATGC CGAAGCGCAG
GTGAGCGACC GTGTGTTGGC GGCAGCGGAC AAGCGCTTCG CGCACAACCC GCCGCAGACC
AAGGAGGCGT ACTACTACCG CCACCTGTTC GAGCAGTTCT TCCCGAGTCG TGCTGCGGCG
GAGACCGTGC CGGGCGGCAA GTCGATTGCC TGTTCGTCGC CGGCCGCCAT TGCCTGGGAT
GCCAGCTTCG CGGCAGCGGC GGACCCCTCG GGCCGCGCGA TTGCCGGCGT GCACGAGCAG
GCACTGGCCT AA
 
Protein sequence
MCSIFGIFGL QAGDDLPALR RHALELSQRQ RHRGPDWSGV YLDEGALLVH ERLAIVDPAG 
GSQPLLSADG QLALAVNGEI YNHQQLKATL TTAYDFQTGS DCEVINALYR QGGTPAQWLE
QLNGIFAFAL WDRDAGRVLV ARDPVGVVPL YWGHDAHGRL RVASEMKALV DTCADVAQFP
PGHYFDSASG ELVRYYQQPW RDYGDVQGRQ ADLAELRQAF EHAVERQLMS DVPYGVLLSG
GLDSSLVAAV AARYARRRIE DGGQTEAWWP RLHSFAIGLK GSPDLAAGAI AAEALGTVHH
GFEYTFEEGL DALPEVIRHI ETYDVTTIRA STPMFLLARR IKAMGVKMVL SGEGSDEIFG
GYLYFHKAPD AREFHDELVR KLDALHNYDC LRANKSMMAW GVEPRVPFLD REFLDVAMRF
DAAHKMVGAG FGGRRIEKAV LREAFEGYLP DSILWRQKEQ FSDGVGYGWI DGLKAHAEAQ
VSDRVLAAAD KRFAHNPPQT KEAYYYRHLF EQFFPSRAAA ETVPGGKSIA CSSPAAIAWD
ASFAAAADPS GRAIAGVHEQ ALA