Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1280 |
Symbol | asnB |
ID | 6475132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1456135 |
End bp | 1457826 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730445 |
Product | asparagine synthetase B |
Protein accession | YP_002027668 |
Protein GI | 194365058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.613021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTTCGA TCTTCGGAAT CTTCGGCCTG CAGGCCGGTG ACGATCTTCC CGCCCTGCGC CGCCATGCGC TGGAACTGTC GCAGCGCCAG CGCCACCGTG GCCCGGACTG GAGCGGCGTG TACCTCGACG AAGGTGCGCT GCTGGTCCAT GAGCGGCTGG CCATCGTCGA CCCGGCCGGT GGTTCGCAGC CGTTGTTGTC GGCCGATGGC CAGCTGGCGC TGGCGGTCAA CGGCGAGATC TACAACCACC AGCAGCTGAA GGCCACGTTG ACCACCGCCT ACGACTTCCA GACCGGTTCG GACTGTGAAG TGATCAACGC GCTGTACCGT CAGGGCGGTA CGCCAGCACA GTGGCTGGAA CAGCTCAACG GCATCTTCGC CTTCGCCCTG TGGGATCGCG ATGCTGGCCG TGTACTGGTG GCACGCGATC CGGTCGGCGT GGTGCCGCTG TACTGGGGTC ACGATGCACA TGGCCGGCTG CGCGTAGCCT CGGAAATGAA GGCACTGGTC GATACCTGTG CCGATGTCGC GCAGTTCCCG CCGGGCCACT ATTTCGACAG TGCCAGCGGT GAGCTGGTGC GCTACTACCA GCAGCCGTGG CGGGACTATG GCGACGTGCA GGGCCGCCAG GCCGACCTCG CCGAGCTGCG CCAGGCTTTC GAACATGCGG TGGAACGCCA GCTGATGAGT GACGTGCCGT ACGGCGTACT GTTGTCCGGC GGCCTCGATT CGTCGCTGGT GGCGGCGGTG GCCGCGCGCT ATGCGCGCCG CCGCATCGAG GATGGCGGGC AGACCGAAGC CTGGTGGCCG CGCCTGCATT CGTTCGCGAT CGGCCTGAAG GGCTCGCCCG ATCTGGCGGC CGGGGCGATC GCTGCCGAGG CACTCGGCAC CGTGCATCAC GGCTTCGAAT ACACCTTCGA GGAAGGCCTC GATGCGCTGC CGGAGGTGAT CCGCCACATC GAAACCTATG ACGTCACCAC CATCCGTGCC TCCACGCCGA TGTTCCTGCT GGCGCGGCGG ATCAAGGCGA TGGGCGTGAA GATGGTGCTC TCCGGCGAAG GCAGCGATGA GATCTTCGGT GGCTACCTGT ACTTCCACAA GGCGCCGGAT GCACGCGAAT TCCACGACGA GCTGGTACGC AAGCTCGATG CCCTGCACAA CTACGATTGC CTGCGCGCCA ACAAGTCGAT GATGGCCTGG GGCGTGGAGC CGCGTGTCCC GTTCCTCGAC CGCGAGTTTC TCGACGTGGC GATGCGCTTC GATGCCGCGC ACAAGATGGT CGGTGCCGGC TTCGGTGGGC GCCGCATCGA GAAGGCGGTG CTGCGCGAAG CATTCGAGGG CTACCTGCCG GACAGCATCC TGTGGCGGCA GAAGGAGCAG TTCAGCGATG GCGTCGGCTA CGGCTGGATC GACGGGCTGA AGGCGCATGC CGAAGCGCAG GTGAGCGACC GTGTGTTGGC GGCAGCGGAC AAGCGCTTCG CGCACAACCC GCCGCAGACC AAGGAGGCGT ACTACTACCG CCACCTGTTC GAGCAGTTCT TCCCGAGTCG TGCTGCGGCG GAGACCGTGC CGGGCGGCAA GTCGATTGCC TGTTCGTCGC CGGCCGCCAT TGCCTGGGAT GCCAGCTTCG CGGCAGCGGC GGACCCCTCG GGCCGCGCGA TTGCCGGCGT GCACGAGCAG GCACTGGCCT AA
|
Protein sequence | MCSIFGIFGL QAGDDLPALR RHALELSQRQ RHRGPDWSGV YLDEGALLVH ERLAIVDPAG GSQPLLSADG QLALAVNGEI YNHQQLKATL TTAYDFQTGS DCEVINALYR QGGTPAQWLE QLNGIFAFAL WDRDAGRVLV ARDPVGVVPL YWGHDAHGRL RVASEMKALV DTCADVAQFP PGHYFDSASG ELVRYYQQPW RDYGDVQGRQ ADLAELRQAF EHAVERQLMS DVPYGVLLSG GLDSSLVAAV AARYARRRIE DGGQTEAWWP RLHSFAIGLK GSPDLAAGAI AAEALGTVHH GFEYTFEEGL DALPEVIRHI ETYDVTTIRA STPMFLLARR IKAMGVKMVL SGEGSDEIFG GYLYFHKAPD AREFHDELVR KLDALHNYDC LRANKSMMAW GVEPRVPFLD REFLDVAMRF DAAHKMVGAG FGGRRIEKAV LREAFEGYLP DSILWRQKEQ FSDGVGYGWI DGLKAHAEAQ VSDRVLAAAD KRFAHNPPQT KEAYYYRHLF EQFFPSRAAA ETVPGGKSIA CSSPAAIAWD ASFAAAADPS GRAIAGVHEQ ALA
|
| |