| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1264 |
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| Symbol | |
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| ID | 6475116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1438181 |
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| End bp | 1439719 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642730429 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002027652 |
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| Protein GI | 194365042 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.417106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCTG AGCTGACAGC TGCCCTGGCG CTCTGCCGCA ACCTGCCTTC GCCACCCGGT
ATTGCCCTGC GCATCATCGA ACTGGCCCAG GACCCGGAAG CGGACATCGC CACCGCCGCC
GACATCATCG CCATCGACAT GGCGCTGAGC GCTCGCATGC TGCGCATCGC CAATTCGCCG
CTGTATGCCA GCCGCCGCCG GATCGAGAAC CTCGGCCAGG CACTGACCAT GCTCGGCCTG
AACGCCACGA TCAGCCTCGC TCTGGGCTTC ACCGTCACCC AGGGCCTGAC CGGCGGTGCC
GGTGCCGACC ACGACCTGCG CCAGCGCGCC TGGAAGCGCA GCATCCTCAG CGCACTGGCC
GCCAGCCAGC TGGGCCAGGC CCGCGGCCTG CGCCGGCTGG AGGAGCTGAT GCTGGCCGGC
CTGCTGCAGG ACCTCGGCGT GCTGTGCCTG GCCCAGGCCG AGTCGGAACG CTACCTGCCG
CTGCTGCGCG AGGCCGGCGA CAACACCGAC CTGGTGGCGC GCGAGCGCAG CGAACTGGGC
TGCAGCCACG CCGATGTCGG CGCCTGGGTG GCCGAACAAT GGGGCCTGCC GCGCTACCTG
GTGGAAAGCA TCAGCCACAG CGAGGACGAA GGCGCTGCCG AATCGCCGTT CCAGGCGTGC
GTGCAGCTGT CCGGCGCGGT GGCCGACATC TGGCTGGATA GCGATGCCGA CGCTGCCCGC
GAACGCGCCC TGCAGCAGGT TCACGACCGC CTGGAGCTGG ACAGCGCCCG CTTCGACCAG
GTGCTGGCCC GCATCAGTGC CGCCCTGCCG GACATCGCCA GCCTGTTCGA GGCCGGACTG
AACTCGCCGT CGCGGGTGCG CGAACTGATC GACCACGCCC AGGAACTGGC GACCCTGCGC
AACCTGCGCG AACTGCAGGA TGCCGACCAG GCACGTCGTC GCGCCGACGA ATTCGAGGCC
CGGGCCAAGC GCCTGGCCGA CCAGGCGCAC CGCGACGCAC TGACCGGCGT GCTCAACCGC
CGCCAGTTGG AGGCGGTGCT GGAACAGGAA TTCCTGCGCG CCGGCCGCCA GGGCTGGCCA
CTGTCGGTGG CCTTCATCGA CCTCGACGAC TTCAAGAAGA TCAACGACGC GCACGGCCAC
CTGACCGGCG ACGAAGTGCT GCGGGCCTTC GCCGGCAAGC TGCAGGGCCA GCTGCGCAAC
AGCGACACCG TAGCCCGCTT CGGCGGCGAG GAGTTCGTTG CGCTGCTGCC CAACACCAGC
GAATCGGTGG CACTGGACGT AATCCGCCGG GTATTGGCCA ACATCGTTGC CACGCCGATG
GCCGAGATCG AGAGCGGGCC GCTGTTCGTC ACCTTCTCCG CCGGCGTGGC CACCCAGGGC
GGCTACGAGC GCTTCGCTGA CGTGCAGGAC CTGCTGCGCG CCGCAGACGA CGTGCTGTAC
CGCTCGAAGA ACCTGGGCCG CAACCGGGTG ATCGCCCGCT CGCCCGGCGC CCTCGGCCAC
GACGAGCTGT CAGCCACTGC CGGCGCCGAA CTGGGCTGA
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| Protein sequence | MPPELTAALA LCRNLPSPPG IALRIIELAQ DPEADIATAA DIIAIDMALS ARMLRIANSP
LYASRRRIEN LGQALTMLGL NATISLALGF TVTQGLTGGA GADHDLRQRA WKRSILSALA
ASQLGQARGL RRLEELMLAG LLQDLGVLCL AQAESERYLP LLREAGDNTD LVARERSELG
CSHADVGAWV AEQWGLPRYL VESISHSEDE GAAESPFQAC VQLSGAVADI WLDSDADAAR
ERALQQVHDR LELDSARFDQ VLARISAALP DIASLFEAGL NSPSRVRELI DHAQELATLR
NLRELQDADQ ARRRADEFEA RAKRLADQAH RDALTGVLNR RQLEAVLEQE FLRAGRQGWP
LSVAFIDLDD FKKINDAHGH LTGDEVLRAF AGKLQGQLRN SDTVARFGGE EFVALLPNTS
ESVALDVIRR VLANIVATPM AEIESGPLFV TFSAGVATQG GYERFADVQD LLRAADDVLY
RSKNLGRNRV IARSPGALGH DELSATAGAE LG
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