Gene Smal_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1089 
Symbol 
ID6478516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1243453 
End bp1244601 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID642730253 
Productprotein of unknown function DUF1624 
Protein accessionYP_002027477 
Protein GI194364867 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTT CCCCCACCCC GCGCCTGGCC TCCATCGACC AGCTGCGCGG CACCGTGATG 
CTGCTGATGC TGCTCGACCA CGTCCGCGAG ACCTTCTTCC TGCAATACCA GGTCAGCGAC
CCGATGGATG CGTCCACGGT CTCTCCCGCC CTGTTCGCCT GCCGTCTGCT GGCGCATCTG
TGCGCGCCGG TATTCGTGCT GCTCACTGGT CTGTCGGCCT GGCTGTACGG CCAGCGCCAG
CCGGATCCAC GCCGCGCCAC CGCCACCTTC CTGCTCAAGC GCGGCCTGTT CCTGGTGGTA
CTGGAACTGA CCCTGGTGAA CTTCGCCTGG ACCTTCCAGC TGCCGCCGGA CACGTTGTAC
CTGCAGGTGA TCTGGGCCAT CGGCCTCAGC ATGATCGCGC TGGCCGGCCT GATCTGGCTG
CCGCGCCCCG CCTTGCTGGT GCTGGCAGTT GCGCTGGTGG CCGGCCATAA CCTGCTCGAC
GGCGTGCGCA TGGAAGGCAA TGGCGCGCTG GCAGTCCTGT GGAAGGTGCT GCACCAGCGC
GACTGGATCG AGGCCGGGGC ACTGCGATTG CGCACCTCCT ACCCGGTGCT GCCGTGGATC
GGGGTGATCG CGCTGGGTTA CCTGATGGGA CCGTGGTTCG CCCGCGAGCG CGCGCCGGAG
CAGCGGCAGC GCTGGCTGTT CTGGGCCGGT GCGGGGGCGC TGGCCCTGTT CGCATTGCTG
CGCTTTGCCA ACGAATACGG CGATTCCCCC TGGCAGTACC AGACCACCGT GCTGCGCACC
TGGCTGAGCA TCTTCAACGT CACCAAGTAC CCGCCGTCGC TGCAGTTCCT GCTGTTGACG
CTGGGCGTGG GCCTGTTGCT GTTGCGACTG TACGAATGGC CGCCGTTGGC ACGTGCGCTG
CGGCCATTGG CCGATATTGG TGCAGCACCG ATGTTCTTCT ACCTGCTGCA CCTGTATGTG
CTGAAGGGGC TGTACCTGGC GGCGCTGGCC GCCTGGGGCC CGACCCACGG CGAGCTGTAT
GCGCTGGATT CGGTCAGCGG CCTGCTGCTG GTGGCCTGTG CATTGGCGGT GGTGATGTAT
CCACCGACGC GGGCATTCGC GCGGTTCAAG GCGCGAAGGC GCGATCTGGC GTGGTTGCGG
TACCTGTGA
 
Protein sequence
MPSSPTPRLA SIDQLRGTVM LLMLLDHVRE TFFLQYQVSD PMDASTVSPA LFACRLLAHL 
CAPVFVLLTG LSAWLYGQRQ PDPRRATATF LLKRGLFLVV LELTLVNFAW TFQLPPDTLY
LQVIWAIGLS MIALAGLIWL PRPALLVLAV ALVAGHNLLD GVRMEGNGAL AVLWKVLHQR
DWIEAGALRL RTSYPVLPWI GVIALGYLMG PWFARERAPE QRQRWLFWAG AGALALFALL
RFANEYGDSP WQYQTTVLRT WLSIFNVTKY PPSLQFLLLT LGVGLLLLRL YEWPPLARAL
RPLADIGAAP MFFYLLHLYV LKGLYLAALA AWGPTHGELY ALDSVSGLLL VACALAVVMY
PPTRAFARFK ARRRDLAWLR YL