Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1044 |
Symbol | |
ID | 6478471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1196858 |
End bp | 1197601 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730208 |
Product | protein of unknown function DUF1080 |
Protein accession | YP_002027432 |
Protein GI | 194364822 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGC CTTTGTTGAT CGCGGCCACG GTGCTGGCCG CCGCACCTGC GTTCGCGCAG GCCGCTGCCG ACCCTGCACG CGATCCGAAG AAGACCGAGG TGTGGACGCC GGTGCCCGCG ACCGTGGCCA CGCCGCCAGG CAAGGCACCG TCCGATGCAA TCGTGCTGTT CGATGGCAAG GATGTCTCCG CGTGGGAGTC GGAGCAGGGC GGACGCGTGC CCTGGAAGAT TGCCGATGGC GCCATGACCG TCGTGCCGGG CAGCAAAGGC ATCCGCACCA GGCAACGCTT CTGCGACGTC CAGCTGCATG TCGAGTGGCG CACACCCACC GACACCAAGG GCTTCGAGGG CCAGAACCGG GGCAACAGCG GCATCTTCCT GCAGGAACTG TATGAGCTGC AGGTGCTCGA CAGTTACAAC AACCCGACCT ATGCCAATGG CCAGGCGGGT TCCATCTACA AACAGGCGAT GCCGTTGGTG AACGCCGCGC GCGCACCGGG CGAGTGGCAG GCCTACGACA TCCTCTGGAA GGCACCGCGC TTCTCGCAGG GCGGTGGGCT TGTGTCGCCC GCGCGCATCA CGGTGCTGCA CAACGGCGTG CTGGTGCAGG ACGACACTGT GCTGGCCGGC AAGACCGAAT ACATCGGTGC GCCTTCCTAC GCGCCCCATG GGTGTGCGCC GCTCTACCTG CAGGAGCACG ACTCCAAGGT CAGCTACCGC AACATCTGGG TGCGCGAGCT GTAG
|
Protein sequence | MIKPLLIAAT VLAAAPAFAQ AAADPARDPK KTEVWTPVPA TVATPPGKAP SDAIVLFDGK DVSAWESEQG GRVPWKIADG AMTVVPGSKG IRTRQRFCDV QLHVEWRTPT DTKGFEGQNR GNSGIFLQEL YELQVLDSYN NPTYANGQAG SIYKQAMPLV NAARAPGEWQ AYDILWKAPR FSQGGGLVSP ARITVLHNGV LVQDDTVLAG KTEYIGAPSY APHGCAPLYL QEHDSKVSYR NIWVREL
|
| |