Gene Smal_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1028 
Symbol 
ID6478455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1172164 
End bp1175748 
Gene Length3585 bp 
Protein Length1194 aa 
Translation table11 
GC content65% 
IMG OID642730192 
Producthypothetical protein 
Protein accessionYP_002027416 
Protein GI194364806 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.937491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA ACTTCTTCCG CTTCGAGCTG CGCGAGCAGC TGCGTTCTCC ACTGCTGTGG 
CTGCTGGCCG CGCTGTTCGC CCTGCTTGCC TTCGCGGCCG CCTCCAGCGA TGCGGTACAG
ATCGGTGGTG GCAGCGGCAA CGTGCACAGC AACGCGCCCA CCGTGATCGC GCAGATGCTG
GGCATCTTCA CCCTGCTCGG CATGCTGGTC AGCGCCCTTT TCGTCAGCAA CGCGCTGCTG
CGTGACTTCG AACTGGGCAC CGCCGAGCTG ATCTTCGCCA GCCCGGTGAA GCGCCGCGAC
TACCTGGCAG GGCGCATCGC TGCCGCCCTG GCCGCCGGCT TGCTGGTCTA CATCGTGATT
GCATTTGGCC TGTGGCTGGC GCCGTTCATG CCGTGGGTCG ATCCCGAACG CATGGGCCCG
ATCAGCTGGC AGGGCTATGC GTGGACGTTC GCAGTCATCG TCATCCCGAA CCTGTTGTTC
ACCACCGCAC TGCTGTCGCT GCTGGCAGCC CTGACCCGTT CGATCCTGTG GGTCTACATC
GGCCTGGTGG CCTACCTGGT GCTGTACGGC GCCAGCGCGG CCCTGCTGCG CGACATCGAC
AACACCTGGA TCGCGGTGCT GAGCGAACCG CTGGGCATGC GCGCACTGGG CCGCACCATC
CGCTACTGGT CCACCGCCGA GCGCAACAGC GGAATTCCCG AGCTGGCCGG CTACCTGCTG
GCCAACCGCA CCCTGTGGCT GGGCGTGGCC GCCGCGCTGT TCGCCGCCAC CTTCGCGTTG
TTCCGCACCG AACGCAGCGG CAGTGGCCGT CGGCGCTGGG GCCGCAGGCA GGCGCAACCG
GTTGCCGATG CCGGCGCCGT CCGCCCCACC CGCGCAACGC TGCCGCGCGT GGTGCCGGCG
TTCACTACCA CCACGGCGTG GCAGCAGTTC CTGCGCCAGG TCCGCTTCGA TACACGCGGC
GTTCTGCGCA GCGTGCCGTT CATCGTGCTG CTGGTGCTGG GCCTGGCCAA CTTCCTGCCC
AGCGCGCTGT TCCGGCAGAC GCTGTATGGC ACCTCGATCT GGCCGGTCAC TTCGCAGATG
ATCATGGGCC TGCAGGGTGC CTTCAGCTGG CTGCTGGTGA TCATCGTGCT GTTCTTCGCC
GGTGAACTGG TCTGGAAGGA ACGCAGCGCG CGCATCAACG AGGTGACCGA TGCCATGCCG
GTGCCGAACT GGGTGCCGCT GCTGGCCAAG TTCACCGCGC TGCTGGCGGT GATCGTCTGC
TTCCAGGCGG CCGGCGCGCT GGCGGCGATG GGCGTGCAGC TGACCAAGGG CTACACCCAC
CTGGAGCCGC TGCTGTACCT GCGCAGCCTG GCGCTGGATT CGGTGGTCTA CATCCTGATG
GGCGGCCTGG CGCTGGTGCT GCAGGTGCTG ACCAACAACA AGTTCGTCGG CTACGCGCTG
CTGATCGTGG TGATGATCGG CCAGGGTGTT CTGGGCCTGC TGGACTACAC GCAGAACCTG
TACAACTTCG GCAGCTGGCC CATCGCGCCC TATTCGGACA TGAACGGCTA CGGTCACTTC
CTGCCGGGGC AACTGGCCTT CCAGGGTTAC TGGGCGCTGT TCCTGCTGAC CCTGATGTGC
CTGGCCTCGG CGTTCTGGGT ACGCGGTGTC AGCCAGGGCT TGCGCCAGCG CCTGGCCCTG
GCCGGTCGTC GCCTGCGCGG TCCGACCGGC GCCTTTGCAG CGCTGGCGGC ACTGGCCTTC
ATCGGTGTGG GCGGCTGGCT GTACTGGAGC ACCAACATCC GCAACGAGTT CCTCTCGCCC
GACCAGCAGC TGGACCTGCA GGCCCGCTAC GAGCGTGAAC TGTCGAAGTA CCGCAACCTG
CCGCAACCAC GCATCGTAGC GGTGGACAAC CGCGTGGACG TGTTCCCGGA AACACAGTCG
ATGGTGATCG ACGCGAACTG GACGGTACGC AACACGCATG CCGTGCCGAT CCAGGAGGTG
CATGTGTCGA TGGGCGATGA CAAGCAGCTG GTCGCCGCCG ATCTGGGCGG ACAGACCCTG
TCGATGCACG ACGCCGACCT TGGCTACCGC ATCTACCGCC TGGCTACGCC ACTGCAGCCG
GGTGAAAGCC GCAGCGTCCA CTTCCGGGTG GTGCAGAGGC CCAACGGCAT CACCGCCGGC
CAGGCACCAA GCAACATCGT CGACAACGGC ACCTTCTTCA ACAGCCGCGT GCTGCCGTCC
TTCGGCTACA ACGAAGGTGC GGAGATCAGC GACCGCAACG AGCGTCGCAA GCGTGACCTC
GGCGAACCGC GGCGCATGCC CAAGCTGGAA GACGAAGCCG CGCGTGCCAA CACCTACATC
TCCAACGATG CCGATTGGCT CGACTTCCGC ACCACGGTCT GCACCGCGCC GGACCAGGTG
GCGCTGGCCC CGGGCTACCT GCAGCACGAG ACCACGGTGA ACGGCCGGCG TTGCTTCAGC
TACGCGATGG ACCGCCCGAT GCTGAACTTC TACGCCTACC TGTCGGCACG CTGGGAGGTG
CGCAGGGCGA AGTACAAGGA CCTCCCGATC GAGGTCTACT TCGATCCGGC GCACGGCTAC
AACGTGGACC GGATGATCGA AGCGGTGCAG AAGTCGCTGG CCTACTACGA AGCGAACTTC
ACGCCGTACC AGCATCGCCA GGTGCGCATC ATCGAGTTCC CGGGCTATGC GCGCTTCGCA
CAGTCGTTCG CCAATACCAT CCCCTACTCC GAGGCCATCG GTTTCATCGC CGACCTGCGT
GATCCGGACA AGGTGGACTA CGTGTTCTAC GTGACCGCGC ACGAGATCGC ACACCAGTGG
TGGGCGCACC AGGTGATCGG TGCCAATGTG CAGGGCGCCA CGGTCCTGTC CGAGTCGCTG
TCGCAGTACT CTGCGCTGAT GGTGATGGAG CAGGAGTACG GCCGCCAGCA CATGCGCCAG
TTCCTCAAGC GCGAGCTGGA CGGCTACCTG TCCGGACGCG GTGGCGAGGC CATCGAGGAG
CAGCCGCTGG AGCGCGTGGA AAACCAGCAG TACATCCACT ACCAGAAGGG TTCGCTGGTG
TTCTACCGGC TGCGCGAGGA GATCGGCGAG CAAGCCCTGA ACCGCGCCCT GAAGCGCTTC
CTGCAGGACA AGGGCTACCA GCAGCCGCCG TATACCACCT CACGCGAACT GCTGGACTAT
ATCCGTGCCG AAACGCCAGC TGATCGCCAG CAGCTGGTCA CCGACCTGTT CGAGAAGATC
AGTTTCTACG ACAACCGCGT GATGACCGCC AGCGCCCGCA AGCGCGATGA CGGTCGCTAC
GACGTAACCC TGGACCTGCA CGCGGCCAAG CAGTACGCCG ATGGCAAGGG CAAGGAGAGC
GACGGCACGA TGGATGACTG GGTTGAGATC GGCGTGTTCG CCAATGGGCC TTCGGGTAAG
GAACGCGACC AGAAGGTGCT GTACCTGCAG CGCCACCACA TCACCAGCGC CGCGCCGAAG
ATCACGGTGA CGGTGGACGA AAAGCCGGAC GAAGCAGGCT TCGACCCGTA CAACAAGCTG
ATCGACCGGG TGAGCGATGA CAACCGGCGC AAGGTGACGA TGTGA
 
Protein sequence
MILNFFRFEL REQLRSPLLW LLAALFALLA FAAASSDAVQ IGGGSGNVHS NAPTVIAQML 
GIFTLLGMLV SALFVSNALL RDFELGTAEL IFASPVKRRD YLAGRIAAAL AAGLLVYIVI
AFGLWLAPFM PWVDPERMGP ISWQGYAWTF AVIVIPNLLF TTALLSLLAA LTRSILWVYI
GLVAYLVLYG ASAALLRDID NTWIAVLSEP LGMRALGRTI RYWSTAERNS GIPELAGYLL
ANRTLWLGVA AALFAATFAL FRTERSGSGR RRWGRRQAQP VADAGAVRPT RATLPRVVPA
FTTTTAWQQF LRQVRFDTRG VLRSVPFIVL LVLGLANFLP SALFRQTLYG TSIWPVTSQM
IMGLQGAFSW LLVIIVLFFA GELVWKERSA RINEVTDAMP VPNWVPLLAK FTALLAVIVC
FQAAGALAAM GVQLTKGYTH LEPLLYLRSL ALDSVVYILM GGLALVLQVL TNNKFVGYAL
LIVVMIGQGV LGLLDYTQNL YNFGSWPIAP YSDMNGYGHF LPGQLAFQGY WALFLLTLMC
LASAFWVRGV SQGLRQRLAL AGRRLRGPTG AFAALAALAF IGVGGWLYWS TNIRNEFLSP
DQQLDLQARY ERELSKYRNL PQPRIVAVDN RVDVFPETQS MVIDANWTVR NTHAVPIQEV
HVSMGDDKQL VAADLGGQTL SMHDADLGYR IYRLATPLQP GESRSVHFRV VQRPNGITAG
QAPSNIVDNG TFFNSRVLPS FGYNEGAEIS DRNERRKRDL GEPRRMPKLE DEAARANTYI
SNDADWLDFR TTVCTAPDQV ALAPGYLQHE TTVNGRRCFS YAMDRPMLNF YAYLSARWEV
RRAKYKDLPI EVYFDPAHGY NVDRMIEAVQ KSLAYYEANF TPYQHRQVRI IEFPGYARFA
QSFANTIPYS EAIGFIADLR DPDKVDYVFY VTAHEIAHQW WAHQVIGANV QGATVLSESL
SQYSALMVME QEYGRQHMRQ FLKRELDGYL SGRGGEAIEE QPLERVENQQ YIHYQKGSLV
FYRLREEIGE QALNRALKRF LQDKGYQQPP YTTSRELLDY IRAETPADRQ QLVTDLFEKI
SFYDNRVMTA SARKRDDGRY DVTLDLHAAK QYADGKGKES DGTMDDWVEI GVFANGPSGK
ERDQKVLYLQ RHHITSAAPK ITVTVDEKPD EAGFDPYNKL IDRVSDDNRR KVTM