| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0956 |
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| Symbol | |
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| ID | 6478311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1100434 |
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| End bp | 1100985 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642730120 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_002027344 |
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| Protein GI | 194364734 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.226208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC CCTTTGCAGC CGTACTCGCG CTTGGTCTTC TTGTCCCCAG CGCCGCCTTC
GCCAAGTCCA CCGACCGCAA CGAAGACATG CACATCGATT CCGGCGCGCA GTCGGGCATG
CTCACCGGCG ACGGCAAGAC CGTGCTGTCG CAGGGCGTGG TCATCACCCA GGGCACGCTG
GACCTGCGCT CGTCCGAGGC CGAGATCTAC CTCAAGGACG GCGAAGCGGT GCGCGTGGTG
TTCACCGGCA AGCAGGCCAA GATGAAGCAG CAGCTCGACG ATGGCACCTG GATGGATGCC
CTGGCCGACC GCATCGACTA CGACATCAAG ACCGAGATCA TTACCCTGAC CGGCAACTAC
AAGGTCACCA GCGCGCGCGG CACCAATGCC GGCCAGCGCA TGGTCTACAA CACCCGCAGC
GGTGAAATGA ACTCCGGCGG CGACGGCAGC CGCGTGCGCA CCGTCATTCC GCCGAAGAAC
AAGACGCCTG CGGCGCCGGC TGCACAACCC AAGGCCAGCA CGCCGGCAGC ACCGGCCGGG
AGCAAGAAGT AA
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| Protein sequence | MKIPFAAVLA LGLLVPSAAF AKSTDRNEDM HIDSGAQSGM LTGDGKTVLS QGVVITQGTL
DLRSSEAEIY LKDGEAVRVV FTGKQAKMKQ QLDDGTWMDA LADRIDYDIK TEIITLTGNY
KVTSARGTNA GQRMVYNTRS GEMNSGGDGS RVRTVIPPKN KTPAAPAAQP KASTPAAPAG
SKK
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