Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0907 |
Symbol | |
ID | 6478180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1048460 |
End bp | 1050598 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642730071 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_002027295 |
Protein GI | 194364685 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.892024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACGA ACTCCAACTC CGCGCACCTG CGCCGGGCGA CGCTGCCTGT CCTGTGCGCG TTGCTCCTGC ACGCCGCGCC CCTGCTTGCC GCTGATGCGG CACCACCGAC CACGCTGGAT ACCGTGCGGG TGGTCGATAC CCGCAGCGGC GAACTCTCGT CCACCGCCAA CGCCGGATCC GCACTGGGCC TGAGCGTGCT GCAGACACCG GCCAGCCTGA CGGTGATTTC GCGCGAACAG CTGGAACAGC GTGGCGACAG CAACCTCAAC GATGCAATCA GCCGGGCAGG CGCGATCAGT GCGATGCCGC ACCCCGGCAA CGGCCTGAGC GCGCTGTCCA GCCGCGGCTT CACCGATGGC GCCTCGGTGA TGCGCCTGTA CGACGGGCTG CGCCAGTACG GCGGCGTGGG CATCACGTTC CCGTTCGATA CCTGGTCGAT CGAGCGCATC GAAGTGCTGC GCGGGCCGGC CTCGGTGATC CACGGTGATG GCGCGATCGG CGGCGTGATC AACATCGTGC CGAAGAAGCC CTCGCGCGGT GCCATCGAAA ACGAGATCAG CGTGACCGTG GGCAGCGAGG ACACCGCGCG CCTGGGCTTC GGCAGCGGTG GCGCGCTGAC GCCCGAGCTG GCCTACCGGC TGGATGTGAG TGGCAACTAC AGCGGCGGTT GGGTGGACCG TGGCCGCAAC AACGATGCGA CGTTCTCCGG CGCGCTGCTG TGGCAGCCGC GCACCGACCT GCAGCTGACC CTCACCCATG CGCAGGGCTA CCAGCAGCCG ATGCGTTACT TCGGCACGCC GCTGGTCGAG GGCCGCCAGC TGGAGGCGCT GCGCCACCGC AACTACAACG TGGATGACAG CGAGATCCGC TACCGTGACC GCTGGACCCA GCTCGATGCG CTGTGGACGC CGACCGCGAA CGTGGAATGG CGCACGCGCC TCTACCAGAT CGACAGCCAA CGCGATTGGC GCAATGCCGA GGCCTATGTT TACAACCGCG CCACCGGCTT GATCGATCGA TCGGGCAACA CCGAGATCAC CCACAACCAG GACCAGACCG GGCTGACCTC GACGCTGCGT GTGCAGGGAA CGGCGGGTGG CCTGCAGAAC AGCTTCGCGG TGGGCCTGGA TGCCAACCGC GCCCACTTCA AGCACACCAA CAACACCTAT GCTGGCAGTT CGGGCCCGGT CGATCCGTTC GATCCGGTGC CGGGCCAGTT CGTCAGCGAT GCGCCGAACC TGCCGCGCTA CCGCAACCGT GCCGAACAGT ACGCGTTGTT CGTGGAAGAC CGCTTGGCGC TGAGCGAGCG CTGGTCGGTG CTGGGAGGGC TGCGCCACGA CCGCGCGCGC ATCGACCGTA CCGATCTGAT CAGCGGCCAG AACGCGTTCT CGAAGACCTA CAGCAGCACC GGCTGGCGTG CAGGCACGGT GTTCGCGCTG CAGCCGACGC TGAGCCTATA TGCGCAGTAC TCGCAGGCGG CGGACCCTGT CAGTGGCCTG CTGATGATCA GCCCGGCCAA CGGTGCCTTC GATCTGGCCA AGGGCAGGCA GATCGAAGTG GGCCTGAAGC AGGCGTTCGA TGGCGGCGAG TGGACGCTGG CGGCGTATCG CATCCGCAAG ACCGGGCTGC TCAGCCGCGA TCCGCTGGTG CCAGATCGCC GGGTGCAGGT GGGCGCGCAG ACCTCACGCG GTATCGAGGC GTCGTTGAAC TGGAACTTCG CGCCGCACTG GACGTTGGAT GCCAACGCCA CGGTGCTGAA GGCCGAGTTC GAGGACTTCC TGGAGACGGC CGGTTCGCCG CCGATGCTGG TGTCGCGCGA TGGCAACGTG CCGCCGAACG TGGCCGAACG CCTGGCCAAT GTGTGGTTGA GCTGGCGGTT CGCGCCGGAC TGGAGCGCGG CGGGTGGCGT TCGCTATGTC GGCAAGCGCT ACGCCGACAA TGCCAATACG CTGGAATTGC CCGGCTACAG CACCACCGAT CTGGCGCTGA CCTGGCAGGC AGCACCGCGC ACGCGGCTGA CCGCTCGCCT GTTCAACGTG TTCGACAAGG CGTACTACGC CACGGCGTAC TACACCAGTA CACAGTGGCT GCTGGGCGCG GATCGCCGCG TCGAGTTCAC CGTCGATCAT CGCTTCTGA
|
Protein sequence | MKTNSNSAHL RRATLPVLCA LLLHAAPLLA ADAAPPTTLD TVRVVDTRSG ELSSTANAGS ALGLSVLQTP ASLTVISREQ LEQRGDSNLN DAISRAGAIS AMPHPGNGLS ALSSRGFTDG ASVMRLYDGL RQYGGVGITF PFDTWSIERI EVLRGPASVI HGDGAIGGVI NIVPKKPSRG AIENEISVTV GSEDTARLGF GSGGALTPEL AYRLDVSGNY SGGWVDRGRN NDATFSGALL WQPRTDLQLT LTHAQGYQQP MRYFGTPLVE GRQLEALRHR NYNVDDSEIR YRDRWTQLDA LWTPTANVEW RTRLYQIDSQ RDWRNAEAYV YNRATGLIDR SGNTEITHNQ DQTGLTSTLR VQGTAGGLQN SFAVGLDANR AHFKHTNNTY AGSSGPVDPF DPVPGQFVSD APNLPRYRNR AEQYALFVED RLALSERWSV LGGLRHDRAR IDRTDLISGQ NAFSKTYSST GWRAGTVFAL QPTLSLYAQY SQAADPVSGL LMISPANGAF DLAKGRQIEV GLKQAFDGGE WTLAAYRIRK TGLLSRDPLV PDRRVQVGAQ TSRGIEASLN WNFAPHWTLD ANATVLKAEF EDFLETAGSP PMLVSRDGNV PPNVAERLAN VWLSWRFAPD WSAAGGVRYV GKRYADNANT LELPGYSTTD LALTWQAAPR TRLTARLFNV FDKAYYATAY YTSTQWLLGA DRRVEFTVDH RF
|
| |