Gene Smal_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0863 
Symbol 
ID6478135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1010748 
End bp1011692 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content70% 
IMG OID642730026 
Productprotein of unknown function DUF58 
Protein accessionYP_002027251 
Protein GI194364641 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.344005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC GCTGGGCACG CATGCAGCTG TTGGCTCGGC CACGCAGGCC CGAAGCCTTG 
CCGCAGCGAC TGGACCGTCA TCGCATCTAC GTGCTGCCGA CCCGCTTCGG CCTGTTCGTC
GCCACTCTGT TGGCGGCGAT GCTGCTGGGC GCGCTGAACT ACAACAACAA CCCGGCGCTG
CTGCTGGCCC TGCTGCTGGC GGCCGCCGCG ATCGCCAGCG CCATCGCCGC TCACCTGCAG
CTGTCCGGCG TGCAGATCGA TGCGATCGCC GCCGAGCCGG TACCGGCCGG GCAACCGTTG
CGCCTGCGCG TGGACCTGTC GCTGCGCGAT CCGCGCGCGC GCCATGGCCT GCACCTGCAG
CTGGGCGACA GCGAAGCCTG GACCTCACTG CCGGCACACG GTCGCGGTGA GGTGGAACTG
GAGGTACCGA GCGAACGCCG CGGCTGGCTG GAGCTGCCGC GCATCCGCCT GTCCACCACC
CAGCCACTGG GACTGGTGCG GGCGTGGTCG TGGGTGTGGC CGGAACAACC GCTGCTGGTC
TATCCACTGG CCGAGACAAC CGCACCTGCA CTTCCGGAGA GTGGCAACGC CCCCCTGCAC
ACGCGTGCCC ATGCCAGTGG CGAGGAACTG CATCAGCTGC GCCCCTACCG CGCCGGCGAC
GCGCCACGCA GCATTTCCTG GAAGCACTCC GCGCGCCGCG ACAGCCTGCT GGTGCGCGAG
TATGAAAAGC CGATCGGCAT CGAAGTGGTG CTGGATTGGC GCATGCTGGC ACCGCTGGAC
CACGAAGCAC GCATCGCGCG GCTGGCGCGC TGGGTCGGCA TGGCCGAACG CGAGGGGCGA
CGCTACACCC TGCTGCTGCC GGCGCATCCA CCGTTCGGCC CCGGCCAGGG TGCCAACCAT
CACCACCTGT GCCTGCGCGC GCTGGCGCTG ATGCCCCATG GCTGA
 
Protein sequence
MTTRWARMQL LARPRRPEAL PQRLDRHRIY VLPTRFGLFV ATLLAAMLLG ALNYNNNPAL 
LLALLLAAAA IASAIAAHLQ LSGVQIDAIA AEPVPAGQPL RLRVDLSLRD PRARHGLHLQ
LGDSEAWTSL PAHGRGEVEL EVPSERRGWL ELPRIRLSTT QPLGLVRAWS WVWPEQPLLV
YPLAETTAPA LPESGNAPLH TRAHASGEEL HQLRPYRAGD APRSISWKHS ARRDSLLVRE
YEKPIGIEVV LDWRMLAPLD HEARIARLAR WVGMAEREGR RYTLLLPAHP PFGPGQGANH
HHLCLRALAL MPHG