Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0827 |
Symbol | |
ID | 6478012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 959983 |
End bp | 960375 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642729977 |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_002027215 |
Protein GI | 194364605 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG CCGACGACGG CAGCAAGGAC CGCATCGCCG AGTTCACCGA TTTCCGCAAG CGCATGAACG AGCGCATCCT GGGCGAGCCG AACCAGGTGG TGCGGCGCTT CTTCGCGCTG GACACGCAGA CCTACCAGGC CGGCGCGCTG GACGTGAAGA CCAAGGAGCT GCTGGGACTG GTGGCCTCGA TGGTTCTGCG CTGCGACGAC TGCATCAGCT ACCACGTGGC CCAGTGCAAG GACGCCGGGG TGACCCGCGA AGAGTTCTTC GAGACCTTCT CGGTCGGGCT GGTGGTCGGC GGTTCCATCG TCATCCCGCA CCTGCGCCGC GCGGTCGACT TCCTCGACCA GCTCGAAGGC GGCGCCGCCG CCCCCGAAGC GCACGCGCAC TGA
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Protein sequence | MSAADDGSKD RIAEFTDFRK RMNERILGEP NQVVRRFFAL DTQTYQAGAL DVKTKELLGL VASMVLRCDD CISYHVAQCK DAGVTREEFF ETFSVGLVVG GSIVIPHLRR AVDFLDQLEG GAAAPEAHAH
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