Gene Smal_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0827 
Symbol 
ID6478012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp959983 
End bp960375 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID642729977 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002027215 
Protein GI194364605 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCGACGACGG CAGCAAGGAC CGCATCGCCG AGTTCACCGA TTTCCGCAAG 
CGCATGAACG AGCGCATCCT GGGCGAGCCG AACCAGGTGG TGCGGCGCTT CTTCGCGCTG
GACACGCAGA CCTACCAGGC CGGCGCGCTG GACGTGAAGA CCAAGGAGCT GCTGGGACTG
GTGGCCTCGA TGGTTCTGCG CTGCGACGAC TGCATCAGCT ACCACGTGGC CCAGTGCAAG
GACGCCGGGG TGACCCGCGA AGAGTTCTTC GAGACCTTCT CGGTCGGGCT GGTGGTCGGC
GGTTCCATCG TCATCCCGCA CCTGCGCCGC GCGGTCGACT TCCTCGACCA GCTCGAAGGC
GGCGCCGCCG CCCCCGAAGC GCACGCGCAC TGA
 
Protein sequence
MSAADDGSKD RIAEFTDFRK RMNERILGEP NQVVRRFFAL DTQTYQAGAL DVKTKELLGL 
VASMVLRCDD CISYHVAQCK DAGVTREEFF ETFSVGLVVG GSIVIPHLRR AVDFLDQLEG
GAAAPEAHAH