Gene Smal_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0620 
Symbol 
ID6477566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp733946 
End bp734635 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID642729765 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002027008 
Protein GI194364398 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.222182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AACGCCTGCG CCTGCTGTTG ATCGAAGACA ACCTGCCCTT GGCCTCGGCC 
ATCGTCGACA TGCTGCAGGC GCAGGGCCAC CAGGTGGATT TCGCCGCCGA CGGCGAGCTC
GGCCTGCGGA TGGCCCTGGC CAATCCGCCG GACGTCGTGC TGCTCGACCT GGGCCTTCCG
GGAATCGATG GGACCACTGT GTGCCGTCGC CTGCGCGATG GCTGCGACCG CCACGTGCCT
GTGCTGATGC TGACCGCACG CGACGCGCTG GTCGACAAAC TGCAGGGCTT CGCCGCCGGC
GCAGATGACT ACCTCATCAA GCCGTTCGAC GATGCCGAGC TGCTGGCGCG CTGTCTCGCG
CTGGCGCGCC GCCATCGCCT CAACCAGCCC CATCGGTTGC AGATCGGCCC ACTGTGCATC
GATCGCCGCA CTGGCCAGGC GTGGCGTGAT GGCGTTGCGC TGGAGATGCC ACAGCTGGCT
CAGCGCATCC TGCTCGAACT GGCCGAAGCG TGGCCGTGCA CCGTGACCCG CAGTGAACTG
GTACAGCGCT TGTGGGGCGA TGAAGCGCCA CCGTCGGACC CGCTACGCTC GCATCTGTAC
CTGTTGCGGC AGGTACTGGA TCGACCCTTC GACAGCGAGA TGCTGCGTAC CGTACATGGT
GTCGGTTTCC GTCTGGAAGC ATCACCATGA
 
Protein sequence
MNAERLRLLL IEDNLPLASA IVDMLQAQGH QVDFAADGEL GLRMALANPP DVVLLDLGLP 
GIDGTTVCRR LRDGCDRHVP VLMLTARDAL VDKLQGFAAG ADDYLIKPFD DAELLARCLA
LARRHRLNQP HRLQIGPLCI DRRTGQAWRD GVALEMPQLA QRILLELAEA WPCTVTRSEL
VQRLWGDEAP PSDPLRSHLY LLRQVLDRPF DSEMLRTVHG VGFRLEASP