| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0518 |
|---|
| Symbol | |
|---|
| ID | 6477422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 609775 |
|---|
| End bp | 610407 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642729663 |
|---|
| Product | 3-oxoacid CoA-transferase, B subunit |
|---|
| Protein accession | YP_002026906 |
|---|
| Protein GI | 194364296 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.19694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTGGA CCCGCGATGA GATGGCGGCA CGTGCCGCAC GCGAACTGAC TGATGGCGCC
TACGTGAACC TGGGCATCGG CCTGCCGACC CTGGTTGCCA ACCACATCCC CGAAGGCGTG
GACGTGTGGC TGCAGTCGGA AAATGGCCTG CTCGGTATCG GCCCGTTCCC GACCGATGCC
GAAGTCGATG CCGACCTGAT CAACGCCGGC AAGCAGACCG TGACCGCACG CGCCGGTGCC
AGCTACTTCG GCAGCCACGA CAGCTTCGCG ATGATCCGCG GCGGCCACGT CAACCTGGCC
ATCCTCGGCG CCATGCAGGT CACCCACAAG GGCGACCTGG CCAACTGGAT GGTGCCCGGC
AAGATGGTCA AGGGCATGGG CGGCGCGATG GACCTGGTGG CCGGCGTGCA GCGCGTGGTG
GTGCTGATGG AGCACACCGC CAAAAACGGC GAACACAAGA TCCTGGCCGA ATGCACGCTG
CCGCTGACCG GCGTGGGCGT GGTCGATCGC ATCATCACCG ACCTGGCGGT GTTCGACGTG
ACTGACAAGG GCCTGTTGCT GGTGGAAGCG GCGCCGGGCG TCAGCGACGA CGAACTGAAG
GAAAAGACTG GCGTGGCGTT CGTTCGCGCG TGA
|
|---|
| Protein sequence | MAWTRDEMAA RAARELTDGA YVNLGIGLPT LVANHIPEGV DVWLQSENGL LGIGPFPTDA
EVDADLINAG KQTVTARAGA SYFGSHDSFA MIRGGHVNLA ILGAMQVTHK GDLANWMVPG
KMVKGMGGAM DLVAGVQRVV VLMEHTAKNG EHKILAECTL PLTGVGVVDR IITDLAVFDV
TDKGLLLVEA APGVSDDELK EKTGVAFVRA
|
|---|
| |