Gene Smal_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0324 
Symbol 
ID6478120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp389703 
End bp390647 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID642729469 
Productribonuclease BN 
Protein accessionYP_002026712 
Protein GI194364102 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.290543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC AATCGCACTC CCCCGCCGAC ACGCGTCCCC ACGGCATTCC CGCACGGCTT 
CGCCACTACG CTGACCGCCT GCAGGACAGC TTCCCGATGG CCGTCGCCAA GCGCTTCGTC
GAAATCGACG TGCTGACCCA GGCCGCCTCG GTCTCCTTCT ACGCCCTGCT GTCGATGGCA
CCGCTGCTGG TGCTGCTGCT GTGGCTGACC GCCTCGCTGT ACCCACCGGC ACAACAGACG
CTGATCAGCC AGATCGGTTC GGTGGCCGGC AGCAGCGTGG CCAGCGTCGC CGACACCGTG
CTGCACAACG CCAACAGCCA GCCCAGCGTC GGTTCATTGG CCGGGCTGTG GAGCACGCTG
CTGCTGTTCA TCGGCGCCAC CGCGGTGTTC GCCCAGCTGC AGAACGCGCT GAACCGCATC
TTCCATACCA GTGGCCAGCG CCTGGAAGGC GTCAAGGCCT GGCTGCGCAA GCGCGTGTTC
TCGTTCGGCG TGGTGCTGGC GCTGGGCTTC CTGCTGATCC TGTCGATGAC CGCCACCACC
GCATTGCAGG TGGTGTTTGC GCAGCTGCCC TCGGTGCTGC CGGCGATCGG CTACCTGACC
TCGCTGCTGC TGTACACGCT GGCCTTCGCC TTCCTCTACC ACTACCTGCC GGACCGCCGC
GTGGCCTGGC GCCAGGCCTT TATTGGCGGT GCGATCACCT CGGTGCTGTT CACCCTCGGC
CGCTATGGCA TCGGCGTCTA CATCGCCACC GTGGCCCCGG GCAGTGCCTA CGGTTCGATG
GGCGCGCTGG TGATCTCGCT GGTCTGGATC TACTACGCCA CCGCCGTGTT CTTCGTGGGC
GCGCTGATGA CTGCGGTGAT CGACGAACGC CAGCATGCAC GGGCGCAACT GGCCAGGGCC
GGGATCGAGG CCGAACAGGC CAGCCCCGGC ACCGCCAGCG AGTAA
 
Protein sequence
MVEQSHSPAD TRPHGIPARL RHYADRLQDS FPMAVAKRFV EIDVLTQAAS VSFYALLSMA 
PLLVLLLWLT ASLYPPAQQT LISQIGSVAG SSVASVADTV LHNANSQPSV GSLAGLWSTL
LLFIGATAVF AQLQNALNRI FHTSGQRLEG VKAWLRKRVF SFGVVLALGF LLILSMTATT
ALQVVFAQLP SVLPAIGYLT SLLLYTLAFA FLYHYLPDRR VAWRQAFIGG AITSVLFTLG
RYGIGVYIAT VAPGSAYGSM GALVISLVWI YYATAVFFVG ALMTAVIDER QHARAQLARA
GIEAEQASPG TASE