Gene Smal_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0252 
Symbol 
ID6477955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp301831 
End bp302988 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID642729386 
Productprotein of unknown function DUF214 
Protein accessionYP_002026640 
Protein GI194364030 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.206275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.655167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT TCTCGTTGGT CTGGGCGCAG CTGTTCCGCA CCCGCACCCG CACCTTGTTG 
ACCCTGCTGT CGGTGGTGGC CGCGTTCCTG CTGTTCGGCA TGCTCGATTC GGTGCGCGTG
GCGTTCACCT CCGGTGGTAG CGTGGAAGGT GCCAACCGGC TGGTCACTGC CTCGCGCCTG
TCGATCACCC AGTCGCTGCC GATCCGCCTG GAAACGCAGA TCCGCCAGGT CGCCGGTGTA
CGCGACGTGG CCTATGGCAT GTGGTTCGGC GGCATCTACC AGGACCCGAA GAATTTCTTC
CCGAACTTCT CGGTGTCACC CAACTACTTC GATGTCTACC GCGAACTGCA GATCGACCCG
GCGCAGCTGG AAGACTGGAA GAACACCCGC ACCGGCGCCA TCGTCGGCGA GACCCTGGCC
AAGCAGTTCG GCTGGAAGAT CGGCGACACC ATTCCGCTGC AGGCGACAAT CTTCCCGCGC
GGCGGCAGCA ACGACTGGCC GCTGGAGTTG AAGGGCATCT ACCGTTCCAG GGATCCGGCA
CAGGCCTCCA ACGAAGAACG CCAGTTGATG ATGAACTGGA AGTACTTCGA TGAGTCCAAC
GACTACATCA AGAACCAGGT GAGCTGGTAC ACGGTGACGC TGGACAACCC GGACCACTCT
TCGCGGGTGG CGCAGGCGAT CGACGCGATC TCGGCCAACT CCGACCACGA AACCAAGACC
CAGACCGAAT CGGCGTTCCA GCAGGCCTTC GTCAAGCAGT TCGCCGACAT CGGCATGATC
GTCACCTCGA TCATGGGTGC GGTGTTCTTC ACCCTGCTGC TGTTGACCGG CAACACCATG
GCGCAGGCGG TGCGCGAGCG CGTGCCCGAA CTGGCCACGC TGAAGACGCT GGGCTTCAAG
GACAGCACCG TGCTGATGCT GGTAATGGTG GAGTCGGTGC TGCTGATCGG CCTCGGTGGC
CTGATCGGCA TGGGCCTGGC TGCACTGATC CTGCCGGCGA TCGGGCCAAA GAGCATGGGC
ATGCTGCCGC CGCACGTGCC GACGCCGACC TGGCTGATGG GGCTGGGCCT GATCGTGGTG
ATCGGCATCA TCGTCGGCCT GCTGCCGGCG CTGCGTGCCA AGCGCCTGAA GATCGTCGAC
GCACTGGCCG GCCGCTGA
 
Protein sequence
MKYFSLVWAQ LFRTRTRTLL TLLSVVAAFL LFGMLDSVRV AFTSGGSVEG ANRLVTASRL 
SITQSLPIRL ETQIRQVAGV RDVAYGMWFG GIYQDPKNFF PNFSVSPNYF DVYRELQIDP
AQLEDWKNTR TGAIVGETLA KQFGWKIGDT IPLQATIFPR GGSNDWPLEL KGIYRSRDPA
QASNEERQLM MNWKYFDESN DYIKNQVSWY TVTLDNPDHS SRVAQAIDAI SANSDHETKT
QTESAFQQAF VKQFADIGMI VTSIMGAVFF TLLLLTGNTM AQAVRERVPE LATLKTLGFK
DSTVLMLVMV ESVLLIGLGG LIGMGLAALI LPAIGPKSMG MLPPHVPTPT WLMGLGLIVV
IGIIVGLLPA LRAKRLKIVD ALAGR