Gene Smal_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0242 
Symbol 
ID6477945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp288519 
End bp289811 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content67% 
IMG OID642729376 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002026630 
Protein GI194364020 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.607361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.982813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC GAGTCCTTAC CGGCATCACC CCCTCCGGCA CGCCCCACCT GGGCAACTAC 
GTTGGCGCCA TCCGTCCGGC CATCGCGGCC AGCCGCGCGC CGGGGATCGA GAGCTTCTTC
TTCCTGGCCG ATCTGCACAG CCTGATCAAG TCGCAGGACC CGCAGCGCAC CCAGCGCGCG
ACCCTGGAGA TCGCGGCCAG CTGGCTGGCC TGCGGCCTGG ACCCGGAACA CGTGTGGTTC
TACCGCCAGA GCGACATCCG CGAGACCACC GAGCTGATGT GGTTCCTGAC CGCGATTGCC
AGCAAGGGCA TCCTCAACCG CGCGCATGCC TACAAGGCGG CGGTGGACAA GAACCGCGAG
GAAGGCGTGG ACGAGGACGC AGGCGTCAGC GCCGGCCTGT TCATGTACCC GGTGCTGATG
GCGGCCGACA TCCTGATCTT CAAGGCCAAC CAGGTACCGG TGGGCCGTGA CCAGATCCAG
CACATCGAGA TGGCGCGTGA CTTCGCCCAG CGCTTCAACC ACGTGTACGG CAAGGAGTAC
TTCCCGCTGC CGGACGTGGT GATCGACGAG CAGGTGGCGA CGTTGGCCGG CCTCGACGGC
CGCAAGATGA GCAAGAGCTA CCACAACACC ATTCCGCTGT TCGTGCCGCG CGAAGAGCTG
AAGAAGCTGG TGTTCTCGAT CCTGACCGAC TCGCGCGCAC CGGGCGAGCC GAAGGACACC
GAGGGCTCGG CGCTGTTCCA GATGTACCAG GCGTTCGCCA CCCCGGAACA GACCGCGGAA
TTCGCCAAGG CGTTCGCTGC CGGCATCAGC TGGGGCGATG CCAAGCAGCA GCTTTTCGAG
CGCATCGACA GCGAGCTGTC GCCGCTGCGC GAGCGCTACA ACGCGCTGAT GGCCGAGCCG
GAGAAGATTG AAGCGCTGCT CAAGCGCCGT GGCCAGCAGC TGCGCGAGCA GCTGGCGGCC
CCGCTGCTGG ACGAGCTGCG CCATGCGGTG GGTCTGCGTG ACCTGTCCAG CGCGGGCGAC
ATCGCCAGCG AGGACGCCGG CGTGGCCCGC GTGGCACCGC CGCTGTTCAA GCAGTACCGC
GAAAAGGATG GCCGCTTCTA CTTCAAGCTG ACCGCCGGTG ACGGCACGCT GCTGATCCAG
AGCGAAGGTT TCGATTCGCC GCGCGATGCC GGCCAGCTGA TCGCCGTATT GAAGCAGGCT
GAGCAGGGCG ACCAGCTGCA GAGCGATCTG TTCAAGCTGG ACGCCGAGGT CGATGCCGTG
CTGGCCGCCC TGGCCATGCT GCGCGAAGCG TAA
 
Protein sequence
MTTRVLTGIT PSGTPHLGNY VGAIRPAIAA SRAPGIESFF FLADLHSLIK SQDPQRTQRA 
TLEIAASWLA CGLDPEHVWF YRQSDIRETT ELMWFLTAIA SKGILNRAHA YKAAVDKNRE
EGVDEDAGVS AGLFMYPVLM AADILIFKAN QVPVGRDQIQ HIEMARDFAQ RFNHVYGKEY
FPLPDVVIDE QVATLAGLDG RKMSKSYHNT IPLFVPREEL KKLVFSILTD SRAPGEPKDT
EGSALFQMYQ AFATPEQTAE FAKAFAAGIS WGDAKQQLFE RIDSELSPLR ERYNALMAEP
EKIEALLKRR GQQLREQLAA PLLDELRHAV GLRDLSSAGD IASEDAGVAR VAPPLFKQYR
EKDGRFYFKL TAGDGTLLIQ SEGFDSPRDA GQLIAVLKQA EQGDQLQSDL FKLDAEVDAV
LAALAMLREA