Gene Smal_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0187 
Symbol 
ID6477818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp228277 
End bp229245 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID642729320 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002026575 
Protein GI194363965 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.502015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.832957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC GCCCCCCGCC AAGTCCGCGT TTTTCCTACA AATCCGACCG GCTGAAGCCG 
TTGCGCGCGT TCTGCCAGAC CGTGCGCCTG GGCTCGGTCT CACGGGCAGC TGAGGCACTT
TTCGTCAGCC AGCCGGCCAT CAGCCTGCAG TTGCAGGCCC TGGAGCGTGA GCTGGGGGTG
CCGTTGTTCG AGCGCAGCGG GCGCCGCCTG GTGCCCAGCC GCGAGGGTCA GCTGCTGTAC
GAAATGGCGC AGCCACTGGT GGAGAACCTG GACGGGCTGG AGGCGCGGTT CCGCGACAAG
GTGCGCGGCC TGGACGCCGG CGAACTGAAC ATCGCCGCCA ACAGCTCGAC CATCCTGTAC
CTGCTGCCGA AGATCGTCGA ACGCTTCCGC CTGCATCATC CGGATGTGCG GCTGACCCTG
CACAACGCAA TCAGCGCCGA CGGCACCGAC CTGCTGCGCG AGGACGCCGC TGACCTGGCG
ATCGGTTCGA TGACTGATGT GCCTGCCGAC CTCAGCTATG CCCCCGCCTA CCGCTTCGAG
CAGGTACTGA TCGCCCCGCA CGACCATCCG CTGGCCAGTG GCGGCGAGCT GGAGCTGGCC
GACATCGCAC GCTATCCGCT GGTGCTGCCG CCGAAGCGGC AGATCACCTA CCGGCTGGTC
GACCAGGTGT TCCAGCGCCA CCGCATCGCC TACACCGTGG CGCTGGAGGT GGGCGGCTGG
GAGGTGATCA AGCAGTACGT GGCGATGGGC ATGGGCATTT CCATCGTGCC GGCGCTGTGC
CTGAACGAGG CTGACCGCGA GCGGTTGGCG GCGCGGTCGA TGAAGCGCTG GTTCCCCGAG
CGCAGCTACG GGGTGATCGT GCGGCGTGGC AAGGCGTTGT CGGCGCAGGC GCGGGCTTTC
ATCGAGCTGA TCCAGCCGGA GTTGTTCAGT CCGCGCGATT ATGACCAGAG CGGGCATTCG
GAACGATGA
 
Protein sequence
MTTRPPPSPR FSYKSDRLKP LRAFCQTVRL GSVSRAAEAL FVSQPAISLQ LQALERELGV 
PLFERSGRRL VPSREGQLLY EMAQPLVENL DGLEARFRDK VRGLDAGELN IAANSSTILY
LLPKIVERFR LHHPDVRLTL HNAISADGTD LLREDAADLA IGSMTDVPAD LSYAPAYRFE
QVLIAPHDHP LASGGELELA DIARYPLVLP PKRQITYRLV DQVFQRHRIA YTVALEVGGW
EVIKQYVAMG MGISIVPALC LNEADRERLA ARSMKRWFPE RSYGVIVRRG KALSAQARAF
IELIQPELFS PRDYDQSGHS ER