Gene Smal_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0184 
Symbol 
ID6477815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp225002 
End bp225628 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID642729317 
Productsignal peptidase I 
Protein accessionYP_002026572 
Protein GI194363962 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.782476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG TTGCCCGCCC CCCGTTTTCC GAACGCGCGC TGGTCTGGCT GAAGAAGGAG 
GCGCTGCCGT TGCTGGTGAT GCTTGGCCTG CTCGCCGCCG CCCGCGATAC CCTCGCCAAC
CACTACGTGG TGCCCAGCGG CTCGATGCAG CCGACCCTGC AGCCCGGCGA CCGGGTGGTG
GTGGACATGC GCGCCTATGG CCTGCGCCTG CCGTTTACCG GCAAGGAACT GATGGCGACC
GGCACCCCGC AGCGCGGCGA AGTGGCGGTA TTCGACTCGC CGGCCGACGG CACCCGCCTG
ATCAAGCGCG TGGCTGCAGT GGCCGGTGAT CATGTGCAGC TGCGCGAAGG CCATCTGAGC
ATCAACGGCC AGCCGCTGCA GATCGCCGAC CTGCAGGACG TGGAAGCCTT CGGCGACCGC
CATGCCAGCC TCGACCTGGA CATGGGCGGC GGCCCGGACA TCGCTGACCT GGTGGTGCCG
GACGGCAAGG TACTGGTGCT GGGTGACCAC CGTGGCAACA GCTTCGATGG CCGCTTCTTC
GGCTTCGTCG ACGCCGACAA GGTCTATGGG CGCGCCGTGG CGGTGTACTA CCGCCGGGGT
GCCGGCTTCG AATGGCAGCG TCTGTAA
 
Protein sequence
MDAVARPPFS ERALVWLKKE ALPLLVMLGL LAAARDTLAN HYVVPSGSMQ PTLQPGDRVV 
VDMRAYGLRL PFTGKELMAT GTPQRGEVAV FDSPADGTRL IKRVAAVAGD HVQLREGHLS
INGQPLQIAD LQDVEAFGDR HASLDLDMGG GPDIADLVVP DGKVLVLGDH RGNSFDGRFF
GFVDADKVYG RAVAVYYRRG AGFEWQRL