Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0145 |
Symbol | |
ID | 6477776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 182722 |
End bp | 183489 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642729278 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002026533 |
Protein GI | 194363923 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.818844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACC CTTCCTCCCT CGAAGGTACT GGCACGGCCT ACCAGGAGCA TCTGGCGCCT GCGCCGCTGC GTGGCCACTT CGGCCAGCTG TGGCAGAGCC AGCTTCCTGC CGGTGCCGAT CGGCACATCA CCGTATTGCC CGATGGCTGC GTGGACATTC TCTGGCGCGA CGGCGCGCTG TTCGTGGTCG GCCCGGATCG GGTGGCTGCA CATCCGGCAC TGGCACCCGG TGCACAGGTA CTGGGGGCAC GCTTCCGACC TGGCCAGGCA TTGGCCGCGC TTGGCCTGCC CTTGGCCGAG ATCATCGGCC AGGCGGTGCC ACTGGCCGAT CTGAAGGGCG CGTGGGCGAA GAAGGCTGCA GCCTCCATCG GCGATACCGC GCCAGCGCAG CGCCTGCAGC GGATGGCGTA CTGCCTGCAG CGGCATATGG GCGCTGCCGC ACTCGACACC CCGGCGCAGC GTGCACATGT CCTGTTCCAG GCGCTCGCCG CGGGTCACGC CACGCTGGAT ACGCTGGCGG CGCACTTGAG TCTGAGCCCG CGCAGCCTGC GGCGTTTCAG CCAGTCGCAG TTCGGCTACG GCGCCAAGAC GCTGGAGCGG ATCCTGCGCC TGCAACGCTT TCTTCGCCAT AGCCGCGCGC TGCCGCAGCA CTCGTTGGCG ATGCTGGCCG CTGATGCCGG CTATGCCGAC CAGGCCCACC TCAGCCGCGA GGCGCGCGAG CTTGCCAGCA TGACCGCACG GCAGCTGCGC CTGGAATGGG GCCGATGA
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Protein sequence | MGDPSSLEGT GTAYQEHLAP APLRGHFGQL WQSQLPAGAD RHITVLPDGC VDILWRDGAL FVVGPDRVAA HPALAPGAQV LGARFRPGQA LAALGLPLAE IIGQAVPLAD LKGAWAKKAA ASIGDTAPAQ RLQRMAYCLQ RHMGAAALDT PAQRAHVLFQ ALAAGHATLD TLAAHLSLSP RSLRRFSQSQ FGYGAKTLER ILRLQRFLRH SRALPQHSLA MLAADAGYAD QAHLSREARE LASMTARQLR LEWGR
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