| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2911 |
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| Symbol | |
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| ID | 6462138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2996724 |
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| End bp | 3000062 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642729056 |
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| Product | helicase domain protein |
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| Protein accession | YP_002019670 |
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| Protein GI | 194337876 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1111] ERCC4-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0768227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT TCATGAGCTA TTCCTCAATA CGCGACAACC ATTCTCATGG CACCGTCGGA
GATTTTCTAA AAAAAAACAT CACAGACGCC TCCAGCCTCT CCATTGTCTC CGCCTACTTC
ACAATCTATG CTTTTCACCA CCTGAAGGAT GAATTAACCA GCATAGAAAA CCTTCGCTTT
CTTTTCGGTG AACCAACATT TCTCAAATCA CTCGATCCCA ATAAAGTCAA CACCCGCGAT
TTCAAAATTG AGGACGACCA ACTTGTCATT CCTACTGAAA GCCGCCTTAC CCAAAAAAAC
GTTGCCAGAG AATGCGCCGA ATGGTTAAGC CGCAAAGCTG AAATACGCTC TATGGTCAAG
CCTAACTTCC TGCACGGCAA AATGTACCAC ATTCTTCAAC CCAACGGGGT TGAAAAAGCC
ATTGCCGGAA GCTCCAATTT CACGGTCAAC GGTCTTGGCC TTGGTGGCAA CCGGAATATA
GAACTCAACA TGATCATCGA CAGCGACCGT GACCGCACCG AGCTGAAAGA GTGGTTTGAT
AACCTCTGGA ACGATCAATC GGGTATTGTT GAAAATGTCA AAGAGCAGGT ACTCAGCTAC
CTTGAACAGC TCTATGTCGA AAACAGCCCT GAATTTATCT ACTACAAAAC GCTCTTTCAT
CTTTTCGAAA ACTACCTTGA CGAACAAAAG CAAGGCGGCC TGCTCAATGA GCGTACCGGT
TTTTTCGACA GTGAAATCTG GAGCGAACTC TATGAGTTTC AGAAAGACGG CGTAAAAGGC
GCCATCAATA AAATCCTGAA ACACAACGGC TGCATCATTG CTGATAGTGT TGGTCTTGGC
AAAACCTACG AAGCGCTTGC CGTTGTTAAA TACTTTGAGC TTCTCAATGC AAAAGTCCTC
GTACTCTGCC CTAAAAAACT GTCCGGAAAC TGGTCAATTT ACCAGGCAAG CCAAAACAAC
GCACTCAACC CCTTCGCAAA AGACCGCTTC AGCTATACCG TCCTGTTCCA TACCGATCTG
ACAAGGGTAA GTGGTCGTTC CGACGCCAAC GGTATTGACC TCGGCAACTT CAACTGGGGC
GCTTACGATC TCATTGTCAT TGACGAATCC CACAACTTCC GTGGCAATCC CCTTGAAAAA
ACAAGGGAAG ATGGCTCGAC GCAGATGAAC CGGGCTCAAT GGCTGATGGA AAAAATCATC
CGCTCCGGAG TCAAAACGAA GGTGCTCATG CTCTCTGCAA CACCCGTTAA CAACTCACTC
AGAGATTTGC GAAACCAGAT AGCCTTCATC ACAGAGGGTA AGCCAGACGC CCTTTTTGAG
TGCTGCAAAA TCAAGGATAT CCCCTTTACC CTGAAAAACG CCCAAACCCA TTTTACCAAC
TGGGCCGATA CAAAAAAGAA CCCCAATCGC AATATGAAGC AGTTGCTTGA GCGACTCGAT
TCAGGATTCT TTAAGCTGCT TGACGAATTG ACCATAGCCC GATCGCGCAA GCATATTAAA
ACATTTTACA AAATTGAGGC TATTGGCAAA TTCCCCGAAC GCCAGAAACC ACAATCAGTC
TATCCTGATA TTGATCTCAA AAACCGCTTT CCCTCATACG ACCGGCTCAA CAGGCTAATT
CTCGATTACA AGCTCTCGAT TTTCAATCCA TCTGCTTATG TCAATCCGGA GCAACAGCAG
AAATATGAGG CAATGGCCGG TACTCAGGTA CTGAATTTCT CACAGGCCTC ACGTGAAAGT
TTCTTGATCG GCATGATGAA AGTCAACTTT CTCAAACGCC TTGAAAGCTC CATCAAATCG
TTTGAAATTT CGATGGACCG CACCATTCAA AAAATCGAGC TACTCGAACA AAAAATACAA
AACTTCATCG CTCTCCCGAA CGTGTCTCAG GAAGAAAACC TTTTGACTTA TGAGCCCGGA
GATGATGAGC TTGAGGAAAA CGGCGATGAA CAGGAGCAGT GGCAGGTAGG TAAAAAACTC
AGGTTTGACC TTGCCGACCT TCGGCTTAAT GACTGGCTTG CCGATCTTCA GAAAGACAAG
GAGGCTCTTG TCGATCTGTA CAACAATGCA AAATCAGTAA CGCCCGACAG GGACGCAAAG
CTGCATGAAA TAAAAAAGCT TATCGCCGCA AAATCAATAA AATCCAACAA AAAGGTTCTT
GTCTTCACAG CCTTTGCCGA TACCGCCCAA TACCTCTACG AGAACATCAA TACATGGTAT
CGTCAGGAAT TCAACCTCCA CTGTGCCTTG GTGTGTGGCA GCACCACAAA AACAAGCTAT
GGCAAGAACG ACTACAGCGC CATACTGCTC AACTTTTCTC CCATTGCCAA AAACCGTTCA
AAGTTTGTGG ACTATTCCCA GGAGAGAGAA ATTGACCTGC TCATAGCCAC CGACTGTATC
AGTGAAGGCC AGAACCTTCA GGACTGCGAC TACCTCATCA ACTACGATAT CCACTGGAAC
CCGGTTCGCA TTATCCAGCG CTTTGGCCGT ATCGACCGGC TTGGCAGCAA AAATGAAACT
ATCCAACTGG TCAACTTCTG GCCCACACGA GATCTCGACA ACTACATCAA TCTCCGTGAA
AGGGTAGAAG CCCGCATGGC TCTTGTCGAC GTTACCGCCA CCGGCGAAGA CAACATCCTC
AACACCGAGC AAATTGAAGA GCTGATCACC GACGACCTGA AATACCGTAA CCAGCAGCTC
AAAAAACTTC AGAACGAAGT GCTTGATCTG GAAGAGATGG ACGAAAGCGT ATCACTGACC
GATTTTACCC TCGACGATTT TCGGATTGAA CTCCTCAACT ACCTTGAGAA CAACCGAACC
AAACTAATGC AGGCCCCACT TGGCCTCTAT GCCGTTGTGC CCGCACCCGC AGGCGAACAT
GCCGAAGCCT CCGCAAAAAA ACAGTTCTCC CAAAGTGAGC AGGATATCAT CAAACCCGGT
ACCATTTTTT GTCTTCGCCA AAAAGGAGAG AGTGATGGTA ACGAGCAGGT CAACCCCCTG
AACCCCTACT TTCTAATTTA CATTCGCACA GACGGAACAG TGCGCTATAA TTATGTCAAT
GCCAAGCAGA TACTTGAGGT TTTAAGGATA CTTTGTCAGG GAAACGCCAT GCCTTACGAA
GAACTTTGCG GATTATTCAA TACCGAGACC GACAATGGCC AACACATGGA GCAACACACC
CTGCTTCTAA CAAAGGCAGT CGAAGAGATT ATCCGTGTCT TTAAAAAACG CACAGCACAA
AAACTGACCA CCGACCGTGG AGCCATAATA CAGCCCCGGA AAAAACAAAT TGAACAACTC
AGCCACTTTG AACTCATTAC CTGGCTTATC ATAAAGTAA
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| Protein sequence | MQKFMSYSSI RDNHSHGTVG DFLKKNITDA SSLSIVSAYF TIYAFHHLKD ELTSIENLRF
LFGEPTFLKS LDPNKVNTRD FKIEDDQLVI PTESRLTQKN VARECAEWLS RKAEIRSMVK
PNFLHGKMYH ILQPNGVEKA IAGSSNFTVN GLGLGGNRNI ELNMIIDSDR DRTELKEWFD
NLWNDQSGIV ENVKEQVLSY LEQLYVENSP EFIYYKTLFH LFENYLDEQK QGGLLNERTG
FFDSEIWSEL YEFQKDGVKG AINKILKHNG CIIADSVGLG KTYEALAVVK YFELLNAKVL
VLCPKKLSGN WSIYQASQNN ALNPFAKDRF SYTVLFHTDL TRVSGRSDAN GIDLGNFNWG
AYDLIVIDES HNFRGNPLEK TREDGSTQMN RAQWLMEKII RSGVKTKVLM LSATPVNNSL
RDLRNQIAFI TEGKPDALFE CCKIKDIPFT LKNAQTHFTN WADTKKNPNR NMKQLLERLD
SGFFKLLDEL TIARSRKHIK TFYKIEAIGK FPERQKPQSV YPDIDLKNRF PSYDRLNRLI
LDYKLSIFNP SAYVNPEQQQ KYEAMAGTQV LNFSQASRES FLIGMMKVNF LKRLESSIKS
FEISMDRTIQ KIELLEQKIQ NFIALPNVSQ EENLLTYEPG DDELEENGDE QEQWQVGKKL
RFDLADLRLN DWLADLQKDK EALVDLYNNA KSVTPDRDAK LHEIKKLIAA KSIKSNKKVL
VFTAFADTAQ YLYENINTWY RQEFNLHCAL VCGSTTKTSY GKNDYSAILL NFSPIAKNRS
KFVDYSQERE IDLLIATDCI SEGQNLQDCD YLINYDIHWN PVRIIQRFGR IDRLGSKNET
IQLVNFWPTR DLDNYINLRE RVEARMALVD VTATGEDNIL NTEQIEELIT DDLKYRNQQL
KKLQNEVLDL EEMDESVSLT DFTLDDFRIE LLNYLENNRT KLMQAPLGLY AVVPAPAGEH
AEASAKKQFS QSEQDIIKPG TIFCLRQKGE SDGNEQVNPL NPYFLIYIRT DGTVRYNYVN
AKQILEVLRI LCQGNAMPYE ELCGLFNTET DNGQHMEQHT LLLTKAVEEI IRVFKKRTAQ
KLTTDRGAII QPRKKQIEQL SHFELITWLI IK
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