| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2873 |
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| Symbol | |
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| ID | 6461550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2956808 |
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| End bp | 2959300 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642729019 |
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| Product | SEFIR domain protein |
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| Protein accession | YP_002019634 |
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| Protein GI | 194337840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.205836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA ACCTACCGAT AGAAATTCCA ACTGTTTTTA TTAGCTATGC TCACGAAGGA
TCTCTTGGTG AGAAGGTTGC CGCTCTTGCA GAATGGCTCA CATGTAATGG GATTCAAGTT
ATTACCGACC ACCCATACCA AAATCATCCA CCTGGAAAAG GGTGGCGTGC TTGGATGCAG
CACAGCATCG AAGATGCGAG TATGGTATTA ATTGTATGTT CTGAACGGTA CAAGAAACTA
TTTGAAAAAC GTGACATAGA GGATAATGGG GGGGCTGGAG TTACCTGGGA AAGCGCCATT
ATTACCAGTG ATCTCTATCA TTCTCACCTT AACAATCAAC GTTTTTTTCC AATCCTTCCT
GACGATGGCG ACAATAGTCA TGTTCCGAGT CTTCTTACTG ACTGGAATAA TAATCATCGA
TTTCCAACGG GTAATCAACG TATCCTTTCT CTGATATGTG ACGAGGTAAA AATTCCAACA
CCAAAACGTC CCATACAAAG ATTGCTGCCG GGTGAATTGT TGGGTAGCAA TGACCCGAGA
CTACAGCCTC GCGAAGGGGA TGTTATTGGG CGTAAACATG AGATAGAAGA AGTAAATGCC
TTTTTGACCG GTGACAACTG TCATGCTACG GTTTGCGGGT ATGTTGTCGG TTGTGCTGGA
ATCGGTAAAA CTGAGGTATG TAAGGCTGCG CTCAAATGCT GGCTAAATGG TGATAGCGCC
ACACGCTCGT TTTGGATTCA GGTAAGTGAT GATGCGGATA CTTTGCGTTT ACTCTGGCAA
ATAGGCTCTG CAGTTGGCTT AAAACCAGAG GAAACCGCTC ACATCAGAGA TGTTACCCTA
TTGAGCCCAT TTCTCCCTCG CGGACTTTAT TACTTAGATA ATTTGGAAAG TATTGCCGAG
ACCCCCGGTG GTAAAAAGTT GTTGAGTGAA CTTAGCCAAC TACCGGGTAT ACGCCTTCTT
GCCTCATCGA GAGTAAATCT GGATAGCGTG CTTGGTAATA GCATTTACAT CGACCGGCTT
GATACCGATA GTGCTGTATC GCTTTTTACC AAATGCTGGA ACGGAACTTC TCAGCTTAAC
CTAAGCGAAC TCCGTAACTT CGTTGATCAA CAGTTGGGTG GCCACGCACT CAGCATCACC
CTGTTGGCCC GTCTGGGACG TGCCTACAGT TGGGAAAAGC TACAAGAACT GTGGCACGAA
TGGGGCACGG CTTTGGCCCA GACTCGTAAT CCAAGTCATC GTCTTGATAG TCTGGAAATA
TCTTTCTCCC TTACTGAAAA TTTATTGATA CAGGATCCAG GTGCGTTGGA TCTTTGGCAA
TTTGCCGCTC TTTTTCCAGA GGGTTTTGAT GAGGAAACCC TAAGTTTATG GGAAAAGCAA
AGCGGTCATT GCCAGGCTCG CGTCACCATG ACCGACTTCA ATATACTTGT TCTTGAAAAA
GGATGTTTCA CTATGCTGCC TCCTATCGCA CGCTATGCTT TAGGGCATGT GTCGGATAGT
AATTCCACTA ATTGCAGTTT CAACTGGGAG CGCGCTCGAA ACTACGCCTA CGATTATTTT
ATTGAACTCT CCCGCAATGC TTCTGATACC GTCAGCAGCG ATATAAACAT TCAATCCCGC
GTCAAGAGCA GTCAACAGTT ATGGGCAATT GAACAACTCT GCAAAACGGA TATGGCTTTA
GGCAATCCTA ATGAAGAGTT GGCGCGTAAG CTCATCCGAC AACTACAAAA CGTATACTCA
TTTAACGTTT TGGCAGGACT AGCACTATTA AAACGTGCCA ATCAGATGAT GAGTGGCGCG
TTGCTTGAAA ACCTACTCGG CGACCTGGAG AGGAGACTCG GGAACGTCGA TCTGGCAAGG
GGCCACTATG ATAACGCCAT CGAGCTCTAC AAAAAGGAAC AGGATCAGCT CGGTCTTGCC
AATGCCCTGA AAGCCCTCGG CGACCTGGAG AGTCGACTCG GGAACGTCGA TCTGGCAAGG
GGCCACTATG ATAACGCCAT CGAGCTCTAC AAAAAGGAAC AGGCGAAGCT CGGTCTTGCC
AATGCCCTGA AAGCCCTCGG CGACCTGGAG AGGAGACTCG GGAACGTCGA TCTGGCAAGG
GGCCACTATG ATAACGCCAT CGAGCTCTAC AAAAAGGAAC AGGCGAAGCT CGGTCTTGCC
AATGTGTATC AAAGTTTAGG TGATTTGCTC TTATCGGAAA AGCGAGCAGA AGAAGCGACC
TTAATCTATC AAAATGCTAT CCAACTCTAT CAAGCAGAAC AAGATCCAAT GGGTCTGGCA
TATACTTGGT CTGAACTTAT TCGCTGCCAT CACCTGCTCG GGGACTTAAA TGAGGATGAT
TTGCGAAAGA TTGCAGTTAC AGGGCTTATC GATGCTAAGA GAAGTGGAAT TGAGTCAGTT
TCACAGTACT TAATTGGTGC GCTGTATGAA TTTTTTGACA AAAACGATGA GAGTCTGAAA
CGATTTTTCG AATCCATAAA CAAATATCGA TAA
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| Protein sequence | MQLNLPIEIP TVFISYAHEG SLGEKVAALA EWLTCNGIQV ITDHPYQNHP PGKGWRAWMQ
HSIEDASMVL IVCSERYKKL FEKRDIEDNG GAGVTWESAI ITSDLYHSHL NNQRFFPILP
DDGDNSHVPS LLTDWNNNHR FPTGNQRILS LICDEVKIPT PKRPIQRLLP GELLGSNDPR
LQPREGDVIG RKHEIEEVNA FLTGDNCHAT VCGYVVGCAG IGKTEVCKAA LKCWLNGDSA
TRSFWIQVSD DADTLRLLWQ IGSAVGLKPE ETAHIRDVTL LSPFLPRGLY YLDNLESIAE
TPGGKKLLSE LSQLPGIRLL ASSRVNLDSV LGNSIYIDRL DTDSAVSLFT KCWNGTSQLN
LSELRNFVDQ QLGGHALSIT LLARLGRAYS WEKLQELWHE WGTALAQTRN PSHRLDSLEI
SFSLTENLLI QDPGALDLWQ FAALFPEGFD EETLSLWEKQ SGHCQARVTM TDFNILVLEK
GCFTMLPPIA RYALGHVSDS NSTNCSFNWE RARNYAYDYF IELSRNASDT VSSDINIQSR
VKSSQQLWAI EQLCKTDMAL GNPNEELARK LIRQLQNVYS FNVLAGLALL KRANQMMSGA
LLENLLGDLE RRLGNVDLAR GHYDNAIELY KKEQDQLGLA NALKALGDLE SRLGNVDLAR
GHYDNAIELY KKEQAKLGLA NALKALGDLE RRLGNVDLAR GHYDNAIELY KKEQAKLGLA
NVYQSLGDLL LSEKRAEEAT LIYQNAIQLY QAEQDPMGLA YTWSELIRCH HLLGDLNEDD
LRKIAVTGLI DAKRSGIESV SQYLIGALYE FFDKNDESLK RFFESINKYR
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