Gene Ppha_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2835 
Symbol 
ID6461059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2921173 
End bp2921850 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID642728983 
Productdethiobiotin synthase 
Protein accessionYP_002019598 
Protein GI194337804 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAA CCGTTATTGC TCTCTCCGGT ATCGATACCG GAATCGGAAA AACCTATGCG 
ACCGGTCTGC TTGCCAAAGC CCTGCTTCAG CAGGGCATAA AGGTCATTAC ACAAAAATTG 
GTTCAGACCG GCTGTGAAGG GATTGCGGAA GATATCCTCG AACACCGTCG CCTGATGGGC 
ATCGGAGTGG AGGATGTTGA CCGGGAAGGA CTCACCTCTC CCTCTGTTTT TCGCTATCCT 
GCTTCGCCCT GCCTCTCAGC CGCCCTGGAG GGCACCCAGA TCGATCTTCA CCATATCGGC 
AACACAACCC TTGCCCTGCA GCAACAGTAC GACCTGGTGC TTCTTGAAGG GGTTGGCGGC 
CTTCTTGTCC CTCTTGCTCC TGACCTGCTT TTTGCCGACT ATATCCGGAA TGCAGGATAC 
CCCCTTCTTC TGGTGACGAG CCCACGGCTT GGCAGCATCA ACCATACCCT TCTCTCGATC 
GAGGCCTGTG TGAACAGGGG GATCGTCATC AGGGGTGTTA TCTACAATTG TTTTGGGAGG 
TTCGACAACC TGATCGCTGA TGATACCCGC AAGGTTATCT GCCACTATCT CAGCAAAGCG 
GGATTCACCG TACCGATCAT CGATCTGCGT GAGGGGCAGC TTGACCCGGA TGCTGTTGCG 
CTTCTCTCTC TCTCATAA
 
Protein sequence
MSGTVIALSG IDTGIGKTYA TGLLAKALLQ QGIKVITQKL VQTGCEGIAE DILEHRRLMG 
IGVEDVDREG LTSPSVFRYP ASPCLSAALE GTQIDLHHIG NTTLALQQQY DLVLLEGVGG 
LLVPLAPDLL FADYIRNAGY PLLLVTSPRL GSINHTLLSI EACVNRGIVI RGVIYNCFGR 
FDNLIADDTR KVICHYLSKA GFTVPIIDLR EGQLDPDAVA LLSLS