| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2789 |
|---|
| Symbol | |
|---|
| ID | 6461541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2882353 |
|---|
| End bp | 2883639 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642728942 |
|---|
| Product | Glycine C-acetyltransferase |
|---|
| Protein accession | YP_002019557 |
|---|
| Protein GI | 194337763 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATA ATATTGAGTT AACCAGTTCG ATGCAAATCG GCATGTTGCG TCAAAAACTG
GGATCTTCAG GAATTATACG TTTGAAAGAT GTGGCGAGGC ATATTGATAA CTTGAAAGAT
CTTCAGCTAC AGGAAGATGT TTGGTGTTAT GATCGTTATC CAAAGCAGAG TAGTTCGGCT
AAGGTGATGA TAAAATCTCA TCACAATAAC AAAGAACATG AGTGTGTTCT TTGGTCGGTT
AACCATTATC TCGGCCTGAA CAGGCACCCG AAAGTTATCA AAGCAGCACA AGATGCTATA
GCAGTTTATG GAACCGGATC AGGAACATCC GCAATGAGCG GCGGCTTCTG TGAGTTACAT
AAAAAAATTG AGGAAAAGGT CGCGCAACTG TTTCATAAAG AGGCAGGAAT TATATTCCCA
ACTGGTTATA CAGCAAACGT GGGAGCAATA TCTTCACTTT GTGCAGGACG AAACTCTCTT
ATTCTCATTG ATCGTGAGGT TCATGCGAGT ATTCTCGATG GCTGCAAATT CTCCGGAGCG
AAATATTTGC CATTCAAGCA TAATTCTGTT GATGACCTGA GGAGTAAGAT TAATAAATAT
AAAGAGTTAT ATGATCAGAT TTTTGTCATT ATCGAGTCTG TCTATTCCAT GAGTGGAGAT
ATTGCTCCCT TGCGGGAAAT AGCTGATTTG AAGCAAAGCA ATAATTTTTT TCTCTATGTT
GATGAGGCGC ATAGTTTTGG TATTTATGGA AAAAATGGAG GTGGGCTTTG TCTGGAGATG
GGCATAACTG ATTCTGTTGA TATGCTCATG ACAACACTCT CAAAGGCAGC AGCATCGGTT
GGAGGTGTTG TGGCCGGGAA TAAAGAACTC TGCTCTTTGA TACAAGTCAG TGCTAATGCA
TACATTTTTC AATGTTGTGT GACGCCATCA TCGGCAGCAA CCGTCATTGA GGCTCTTGAT
ATTATTGAAA AAGAGCCAAT ACACCGCGAA ACGTTGCATG ATAATAATCG ATATTTCAGA
GAGAAATTAT TAAAATTGAA TTTTGATCTT GGCGAGAGTA TAAGCCCTAT CGTTCCTATC
TATATCAGAA GTCAAACCAT AATGCAGAAT ATGGAAAAAG AGCTGTATGA ACGGGGAATA
TTCAGCGTTT CAGTGACTTA TCCTGGCGTT AAATTTAATG AAGTCAGATT CCGGTTTATT
GTTTCTGCGG CTCATACCAG ACAACATATT GATTATACCT GTGAAGTGCT CAGCGAGCTT
GGCAAAAAAT ATGGGCTTAT TGAGTAA
|
|---|
| Protein sequence | MDYNIELTSS MQIGMLRQKL GSSGIIRLKD VARHIDNLKD LQLQEDVWCY DRYPKQSSSA
KVMIKSHHNN KEHECVLWSV NHYLGLNRHP KVIKAAQDAI AVYGTGSGTS AMSGGFCELH
KKIEEKVAQL FHKEAGIIFP TGYTANVGAI SSLCAGRNSL ILIDREVHAS ILDGCKFSGA
KYLPFKHNSV DDLRSKINKY KELYDQIFVI IESVYSMSGD IAPLREIADL KQSNNFFLYV
DEAHSFGIYG KNGGGLCLEM GITDSVDMLM TTLSKAAASV GGVVAGNKEL CSLIQVSANA
YIFQCCVTPS SAATVIEALD IIEKEPIHRE TLHDNNRYFR EKLLKLNFDL GESISPIVPI
YIRSQTIMQN MEKELYERGI FSVSVTYPGV KFNEVRFRFI VSAAHTRQHI DYTCEVLSEL
GKKYGLIE
|
|---|
| |