Gene Ppha_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2784 
Symbol 
ID6461885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2878474 
End bp2879565 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID642728937 
Productpeptide chain release factor 2 
Protein accessionYP_002019552 
Protein GI194337758 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.785261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCACA AAAAGAAAGA CTGCAGGAGA TTCATCGTCG CCTCGAACAG TTACGGGGGT 
ATCTTTGACG TCGATGAGCG CAAAGAAAAA ATCGAGGATC TTGAAAAAAT TTCCTTCGAT
CCAGCCTTCT GGAACGACCA GAAAGCAGCA AACAAGGTAC TCAAAGAGCT GAACGAACAT
AAATCATGGA CAGACGCGTA TGAAAAAATC ATTCTGAAGG CGCGCTCCTG TCAGGATGAG
TTCGACATTG CCATAGAACT TGACGATGAA TCCTTCGGCG AAGAGCTGAC TGCACTCATT
GCGTCAATCG AGCATGATAT TTCAGCCATT GAGTTCAAAA ACATGCTTTC GGGAAAGGAT
GATGCTGGCA ACGCCATGAT CACGATTCAT GCCGGAGCTG GAGGAACCGA GGCACAGGAC
TGGGCTGAAA TGCTCTACCG CATGTACATG CGCTGGGCTG AACGCAAGGG ATTCAAAATC
TATACCGACG ACTACCAGGA GGGTGACGGG GCAGGAATAA AAACCGCAAC GCTCGAAATC
GAGGGCCCTT ATGCCTATGG TTATCTGAAA GCTGAAAACG GCGTTCACCG ACTGGTGCGT
GTCTCGCCGT TCGACTCGAA TGCCCGGCGC CACACCTCTT TTGCCAGTGT CTTCACCTAC
CCCGAAGCGC CACCCGATGT TGAAATCGAC GTCCGCAAAG AGGATCTTGA ACTTTCAACG
TTCCGCAGCG GCGGCAAGGG CGGCCAGAAC GTCAACAAGG TGGAGACAGC CGTACGCATC
AAGCACCTCC CGACGGGTAT CGTCGTGGGT TGCCAGGAAG AACGTTCACA GTTCCAGAAC
AGGGAACGCG CCATGAAAAT GCTGATGGCT CAACTCTACC AGCGACAGCG CGATGAAGAG
GATGCCAGAA AACGGGAGAT CGAAGGTAAA AAGAAAAAAA TTGAGTGGGG AAGCCAGATC
CGGAGCTATG TTCTCGATGA CCGGCGCATC AAAGATCACC GCACCAACTA CGAACGATTT
GATGTAGAAA CCGTGCTTGA TGGAGATCTC GACGAGTTCA TGGAAAAATA CCTCTCCGAA
TTCGGTGACT GA
 
Protein sequence
MNHKKKDCRR FIVASNSYGG IFDVDERKEK IEDLEKISFD PAFWNDQKAA NKVLKELNEH 
KSWTDAYEKI ILKARSCQDE FDIAIELDDE SFGEELTALI ASIEHDISAI EFKNMLSGKD
DAGNAMITIH AGAGGTEAQD WAEMLYRMYM RWAERKGFKI YTDDYQEGDG AGIKTATLEI
EGPYAYGYLK AENGVHRLVR VSPFDSNARR HTSFASVFTY PEAPPDVEID VRKEDLELST
FRSGGKGGQN VNKVETAVRI KHLPTGIVVG CQEERSQFQN RERAMKMLMA QLYQRQRDEE
DARKREIEGK KKKIEWGSQI RSYVLDDRRI KDHRTNYERF DVETVLDGDL DEFMEKYLSE
FGD