| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2540 |
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| Symbol | |
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| ID | 6463738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2609469 |
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| End bp | 2610662 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728697 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002019319 |
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| Protein GI | 194337525 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA ACGATGTTGT TGTTATCGGC GGTGGCATAA GCGGCCTCAG CCTTGCTTAT
TATTGTGTGC AGGCTGGCAT GAAAACCACG CTGCTTGAAA AAAATGATAC GATCGGCGGC
TCTTTTGCCT CCCCTCAGTA CAACGCTCAC GGCAAGAATT TCTGGATGGA ACTTGGCGCT
CATACCTGTT ACAGCTCATA CCAGAATCTG CTCGATATTG TTGAAGGGTG TGGCCTGAAG
GATTCGATCA TTCCCCGTGC CAAGGTGCCC TTTACCCTCT TTGTCAATGG AAAAATCAAA
TCTATTGTTT CCCAGCTTCA CATTCTGGAA CTGCTTGTTT CCGTCCCGAA CCTCTTCAAA
CTGAAGAAAA CCGGATTGAG CGTCAGCTCC TATTATTCAA AAATTGTGGG AGAACGCAAC
TACCGGGAGG TGATCAGCCA TTTCTTCAAT GCTGTCCCAT CACAGAAAAC GGACGATTTT
CCTGCCGATA TGATGTTTAA AAGCCGGGAG AAGAGAAAGG ATATGCTGAA GAACTATACC
TTCACCAACG GTTTGCAGAG TGTTGCGCGG GCGATTTCCG CAAAAAGCGG CCTGAATGTT
TTTACCAGTC AGGATGTCAA TTCAGTGGTG TATAAAGATG GCCTCTATGA AATCAGGAGT
GCCGGAGGTG GAGAGTATTC AGCCAAAACA CTTGTTTTTG CAACACCCTC TTCGGTCACC
TCAAAGCTAT TGAAAGGTAT TCAGCCCGAT ATCGCAAACC ATCTTGGCCA GCTCAAGGCT
GCTGATGTTG ATTCTGTAGG GGTCATTGTC CGCAAGGAGA ATGTCAAGCT CAAACCTGTT
GCAGCTCTTA TTGCACCCAA CGACGTTTTC TTTTCAGTCG TATCGCGCGA TACCGTACCA
GACGATAACT ATCGTGGTTT TGTTTTCCAT TTCAAGCCGG GTCTGGATGA AAAGACGAAA
AGAAGCCGCA TCACAGAGGT GCTTGGTATT GGATTTTCGA AGATAGAGCA TACCGAATCA
AAACAGAATA CCGTGCCTAC GCTTCGGCTT GGCCATCATG AGTGGCTTGA AAAAACGGAC
GCACTGTTGA AGGGAAACAA GAGCCTGCTT CTGACCGGTA ATTATTTTGG CGGTATGGCT
ATTGAAGATT GCGTGAGTCG TTCAAAAAGT GAATTTGCCC GACTGAAAGG ATAG
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| Protein sequence | MMQNDVVVIG GGISGLSLAY YCVQAGMKTT LLEKNDTIGG SFASPQYNAH GKNFWMELGA
HTCYSSYQNL LDIVEGCGLK DSIIPRAKVP FTLFVNGKIK SIVSQLHILE LLVSVPNLFK
LKKTGLSVSS YYSKIVGERN YREVISHFFN AVPSQKTDDF PADMMFKSRE KRKDMLKNYT
FTNGLQSVAR AISAKSGLNV FTSQDVNSVV YKDGLYEIRS AGGGEYSAKT LVFATPSSVT
SKLLKGIQPD IANHLGQLKA ADVDSVGVIV RKENVKLKPV AALIAPNDVF FSVVSRDTVP
DDNYRGFVFH FKPGLDEKTK RSRITEVLGI GFSKIEHTES KQNTVPTLRL GHHEWLEKTD
ALLKGNKSLL LTGNYFGGMA IEDCVSRSKS EFARLKG
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