| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2539 |
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| Symbol | |
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| ID | 6463740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2608335 |
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| End bp | 2609417 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728696 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002019318 |
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| Protein GI | 194337524 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.984511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATGG AGATCATCCA GAATTTTTGG GATTTGGTTC AGGGTGGTTA CCTGATACCG
GCACTGGTGG TTCTGGTTGC CCTGATTGGT TATCTGGCGG CAAATTCGCT TTTCAGCAGA
GCACTGGCGG CCATCCGTTT TTCGATCAGA GGCGCCAGTG TTCCTTTGGA ACTCATGGCT
TGGCCATTCC GTTTGCTTCT CTCTCTTGTG GCTTTGGCCA TGCTTCTCCA TGCAATACCC
TTCCCTGAGG ATACAAGGGA TATTCTCCGG CACCTCCTCC TCATTATTGC CATTATCGGT
ATCGCCTGGT TTTTCATGCG ACTGTTCAGG GTTTTTGAGC AATTGATCCT GCAACGTTAC
GCGGCAAAAG TCCGGGAAAA CGAATCTGCA AGAAAAATAT CCACCCATGT CAGCCTCGCC
CGCAAGATTC TCAATGTGCT TCTTCTGCTT CTTGCTGTTT CCAGTGTGCT GATGACCTTT
GATACGGTTC GTCAGGTTGG GTTAAGCATT CTTGCCTCTG CAGGTATTGC CAGCGTGATT
ATTGGCTTTG CAGCCCAAAA AAGCCTCACA ACCCTTATCT CCGGAATCCA GATTGCCATA
ACGCAGCCGA TCAGCATCGA TGATGTGGTC GTTGTTGAAA ACGAGTGGGG GAGAATTGAA
GAGATTACCC TGACCTATGT TGTTGTTCAG CTCTGGGATC AGCGCCGCCT TATTGTGCCC
ATCAACTGGT TTATTGATCG TCCCTTTGAG AACTGGTCAC GCACCTCGGC AGAGCTGCTT
GGTACCGTGT TTTTCTATAC GGATTATACC GTTAATCCCG AAACGCTCCG CCATGAGCTC
GAACGGGTTT TGGCATCAAC TCCTCTCTGG GATGGCCGCG TGGCGCAACT CCACATAACC
AATATCACCG AAAAATCGGT CGAGATACGG GTGCTTGTGA GTGCAGCCAA CTCCTCCAAC
GTCTGGGAAC TGCGCTGTCT GGTGCGTGAA CAGTTGATCG AGTTCATCAA GAGTAACTAT
CCCGGATGGT TGCCGAAACT GACGATGGAG ATGGATAAGG GTAAAATGGC TCCTGAAACA
TAA
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| Protein sequence | MRMEIIQNFW DLVQGGYLIP ALVVLVALIG YLAANSLFSR ALAAIRFSIR GASVPLELMA
WPFRLLLSLV ALAMLLHAIP FPEDTRDILR HLLLIIAIIG IAWFFMRLFR VFEQLILQRY
AAKVRENESA RKISTHVSLA RKILNVLLLL LAVSSVLMTF DTVRQVGLSI LASAGIASVI
IGFAAQKSLT TLISGIQIAI TQPISIDDVV VVENEWGRIE EITLTYVVVQ LWDQRRLIVP
INWFIDRPFE NWSRTSAELL GTVFFYTDYT VNPETLRHEL ERVLASTPLW DGRVAQLHIT
NITEKSVEIR VLVSAANSSN VWELRCLVRE QLIEFIKSNY PGWLPKLTME MDKGKMAPET
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