| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2536 |
|---|
| Symbol | |
|---|
| ID | 6463747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2605800 |
|---|
| End bp | 2606564 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642728693 |
|---|
| Product | DNA topoisomerase type IA zn finger domain protein |
|---|
| Protein accession | YP_002019315 |
|---|
| Protein GI | 194337521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0364956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTG TGAAAAAGCT GCGACCGAGT GGCGGCTATC GTAAGAGCGC CAGTTTTCAA
ACGGCCACTC TGATATATGA CGCCACTTAC TGGTTTTGCG AGAAGTTCAT TGATTCCCGA
TCGCGTACAG TGGATCAGAT GATCCAGGCG GCCCGTTCCG GTAGGCAGAA CATTGCTGAG
GGGAGCCGTG CTGCGGCAAC CTCCTCACAA ACAGAACCGC GGTTGATTAA TGTTGCACGG
GCCAGCCTTG AGGAGCTTCT GCTTGATTTT GAGGACTATC TGCGCCACCG GCACCTTCCT
CAATGGCCGC CTTCAAGCCA GGACGCGTAT GCCGTTCGCG ATGTGCCGAA ACGGTTCAGG
CAAAGCTCTC CTGATCACTC CGATCTGACC GATATTGGTG ATCAGGAGCG GTGGGAGCTC
TATGCGCCAT GGCTGGAGCA TGATGATGCT GCCATTCGCT CCAATGCGAT TATCTGCCTT
ATCAATCAGG CGAATTACCT GCTCGACCAG CAGATTGCTG CGCTGGAAAA GGCGTTTATT
GAGGGCGGGG GCTATAGTGA GCAACTTGCT GTAGCCCGCC TGGTAGAGCG TAAACGGCAG
CAGGAGGAGC ACTCCGGTTC ACTCGAACCT GCTGGTTCCA TTCCCTCATG CCCGCAATGT
GGCAAGCCCA TGGTGTTGCG GACGGCCAAG GCCGGAATAA ACGATGGCAA ACAGTTTTGG
GGCTGCAGCG GCTATCCCGC GTGCCGAGGG GTTGTGAAGC TCTGA
|
|---|
| Protein sequence | MNPVKKLRPS GGYRKSASFQ TATLIYDATY WFCEKFIDSR SRTVDQMIQA ARSGRQNIAE
GSRAAATSSQ TEPRLINVAR ASLEELLLDF EDYLRHRHLP QWPPSSQDAY AVRDVPKRFR
QSSPDHSDLT DIGDQERWEL YAPWLEHDDA AIRSNAIICL INQANYLLDQ QIAALEKAFI
EGGGYSEQLA VARLVERKRQ QEEHSGSLEP AGSIPSCPQC GKPMVLRTAK AGINDGKQFW
GCSGYPACRG VVKL
|
|---|
| |