Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2481 |
Symbol | |
ID | 6461928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2570436 |
End bp | 2571131 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728659 |
Product | hypothetical protein |
Protein accession | YP_002019281 |
Protein GI | 194337487 |
COG category | [S] Function unknown |
COG ID | [COG5634] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.249659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACTTT ACGACGGTTA TGGTGTTCTG GTTGGTACAC TGCATAACTA TTATTGCGAT CGTCCGTTCA GTGGAACGGA GTACTATCAT TGCAATCTCA AGGTTCGTGC AGGAGCAAGA ATTTTTCGCT GTCCTGTTGA CCTCGACAGC AAAAAGGATG CTGATGGAAT GCATTGGCGT GTTGTTGAAC TGGGCTCCGA TGCGTTGCAA TCGCTCCTGC ATCTCCGTGA AGGGTGGCAT CCGCTTGATT CAGAACCGGA TTCGGGCGCC CTCGATTACT ATCGCAGTCC GGAACTTCAG CCGACCGGCA AGTGTATTGA GGCATTGCCG GATTCCGCAA ATACCGCCAC CATTGCGGAA GGGGCGCTGT ACGCTTTATG GAAATATGGC ACGGGGCCAG CCGCATTCCG TGATCTTGAA CCTCTTCTTG TACATTCGAG AAAGCTCTTT ATTTTTGGAG AGCCATTCAG GAGAGGACAT GGTGTGCACA ATATTCACCA GAATCAGGGC GATCCTCCCC AGAGTCGATG GTATCAGGAA AACGGAATAT GGCAGGATGG AGCAGTTGTT GTACAGCGGC GTGACAAGAG TGTTGCTGCA TTTTTATGCA AATTCAAAAC CCAGAGTTTT TTCCCGGACA GCTTTTGTTT CAGGCCTGCG GACAAAGAAG TGAGGAGAGC AAAAAATGAA AATTGA
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Protein sequence | MPLYDGYGVL VGTLHNYYCD RPFSGTEYYH CNLKVRAGAR IFRCPVDLDS KKDADGMHWR VVELGSDALQ SLLHLREGWH PLDSEPDSGA LDYYRSPELQ PTGKCIEALP DSANTATIAE GALYALWKYG TGPAAFRDLE PLLVHSRKLF IFGEPFRRGH GVHNIHQNQG DPPQSRWYQE NGIWQDGAVV VQRRDKSVAA FLCKFKTQSF FPDSFCFRPA DKEVRRAKNE N
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