| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2452 |
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| Symbol | |
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| ID | 6461341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2536343 |
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| End bp | 2537200 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642728632 |
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| Product | CRISPR-associated RAMP protein, Csm3 family |
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| Protein accession | YP_002019254 |
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| Protein GI | 194337460 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.673102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG GATTATTTGG GCACATCGTT TTAAAAGGAA CCATTATTGC TAAAACCGGT
ATGCATATCG GAGCAAGTGC AGATACTGTC GAAATAGGTG GTATTGATAC CCCTGTTATA
AAACATCCTA TAACCTTTGA ACCCTACATT CCCGGGAGTT CTCTAAAAGG TAAGATGCGA
TCCCTGATGG AGAAAATTGA GGTAAGTAAA GGCGTTATAA CATACAATCG TCTTGTTGTA
AAGAATAATA ATATATGGCA ACATGTCTGT AGCGATAGCG AACATGAAAT GTTGATTTCT
AACCATAAAA CACCGGGAGC AACTAACTGT GACGTATGTC GCCTCTTTGG TTCAACTGGA
GAGAATGGAA ATAAAAATCA TCCTGCAAGA ATCTTGGTTC GAGATGCTAA ACTGTCAAAT
CCAAATGATT TAAAGCTAGA TGCTTTACTT ATCATGGAAG CAAAAATGGA AAATGTTTTA
GATAGAGTTC ATGCAGCAGC AACACCTCGA ACAATTGAGC GTGTTCCAGT CGGAGCAAAG
TTTAATTTTG AAATTGTTTA TCGTGTTGAA GGTGAAGGAT GCGTTACTGG AATAAAAAAT
AGTGATAAAA CAAAAGTTCA GACGGATGTA AAAAATATTT TATTGCTGCT CAGAGCGGTT
GAAAGAGAAG GTTTAGGAGG AAATACTTCA CGAGGGTATG GTCAAGTTAG TTTTGAGCTA
ACTGATTTCT TTTACCAAAA AGTGAAAGAA AGTGGTTCAA CAACCCAATT TCCCGAAGAA
AATGGAGTTA TTTTCAAAGG GTTGGAAAAA GTGATAGAAC ATGTTAACGA TAAAGAATTC
AAATTGCAAG AGCTATGA
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| Protein sequence | MSKGLFGHIV LKGTIIAKTG MHIGASADTV EIGGIDTPVI KHPITFEPYI PGSSLKGKMR
SLMEKIEVSK GVITYNRLVV KNNNIWQHVC SDSEHEMLIS NHKTPGATNC DVCRLFGSTG
ENGNKNHPAR ILVRDAKLSN PNDLKLDALL IMEAKMENVL DRVHAAATPR TIERVPVGAK
FNFEIVYRVE GEGCVTGIKN SDKTKVQTDV KNILLLLRAV EREGLGGNTS RGYGQVSFEL
TDFFYQKVKE SGSTTQFPEE NGVIFKGLEK VIEHVNDKEF KLQEL
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