| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2294 |
|---|
| Symbol | |
|---|
| ID | 6462646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2374131 |
|---|
| End bp | 2374961 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642728483 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002019106 |
|---|
| Protein GI | 194337312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC TGCTGCGGAG CAAAGCCAAC TTTGAGATTC TTGAAGGTTT TTTAAGCGAG
CTTCTCGGCG AAGACATTCT TGTCCTTGAC ATTCTCGAAA GCGAAAGCAA CAAGGAGAGG
AGAAGCGACA AATTCAACCG TGTTGACCTC AAGGTAAAAA ACAGAAAGGG CGAAATTATC
ATTATTGAAG TACAGTTTGA GCGGGAACTT GATTATCTGC AGCGGATGCT TTACGGCACT
TCACGGGTCA TCACTGAACA TCAAAAAGAG GGCGAAGCCT ATGCCAAACT GGTCAAGGTT
ATCTCTGTCA ATATCCTCTA CTTTGATCTC GGCCACGGCA CCGACTACAT CTATCATGGT
ACCACCAGCT TCACGGGGAC CCATGACCAT GACAAACTGC AACTCAATAT CAGCCAGCAG
AAGCAGTTCG GCAAGAGTCA GATCAACCAC ATTTATCCTG AATACTACCT GATCAGGATC
AATAACTTTA ACCGGATGGC CACAACATCA CTTGACGAGT GGATCTACTT TCTCAAAAAC
GAAGAGATCA AGGATGAGTT CAAAGCCAAG GGAATTCAGA AAGCAAAACA ATCTTTTTCC
CTCATGAGTA TGCCGGAAGA AGAGCAGTTA GCCTATGCCC GTTATCAGGA TGACCTGCGT
TATGAGGCCA GTCTTGTAGA ATCAAACTAT GGTCTCGGTC GGATGGAGGG CAAGGAGGAG
GGACGGATTG AAGGAAAACT TGAAGTTGCC AACCGATTGG TAGAAAAGGG AATGAGTGCT
GAAGAAGCTG CTGCTGTTGC CGGGATAGAC GCAGAGCTGC TACGCCATTG A
|
|---|
| Protein sequence | MKRLLRSKAN FEILEGFLSE LLGEDILVLD ILESESNKER RSDKFNRVDL KVKNRKGEII
IIEVQFEREL DYLQRMLYGT SRVITEHQKE GEAYAKLVKV ISVNILYFDL GHGTDYIYHG
TTSFTGTHDH DKLQLNISQQ KQFGKSQINH IYPEYYLIRI NNFNRMATTS LDEWIYFLKN
EEIKDEFKAK GIQKAKQSFS LMSMPEEEQL AYARYQDDLR YEASLVESNY GLGRMEGKEE
GRIEGKLEVA NRLVEKGMSA EEAAAVAGID AELLRH
|
|---|
| |