| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2254 |
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| Symbol | |
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| ID | 6462036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2336763 |
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| End bp | 2337641 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728442 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_002019066 |
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| Protein GI | 194337272 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.371924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC CGAACGCTTT GAAATGGAGC GATCTGAAAA CCGGCATATT TTTTGTTTTC
GGCGTCTGTT TTGCCGCCTA TATGGGACTG GTTATTGGGA AAAACAGCAA CCTGTTTACC
GGCGTGACGA ACATTAAAAT TCTTTCTAGT GATGTTCAAA GCCTCGCAGA GAACAACTTT
GTCTCGGTTT CAGGCAAAAA AATCGGCACC GTTTCAAAAA TGGACTTTGA GAGAAGAAAT
GGTACCCTTT TCGTCGTTGC CACGCTCAGA CTGAAAAATG AGTTTGCCCA CCTTGTTACC
AAGGATGCCA GGGCGACCAT CAAATCCCTC GGTATACTGG GCGACAAATA TGTTGATATC
AAAACAGGAA AAGCTGCAGC CGTTAACGAT GGGGATTTTA TCTCTCTTGA AACCGAGGAC
GGAATGGCAA ACCTCACGGC CAGTGCGAAC AACGCTTTTG TCAAAATCAA TGAGCTCCTC
GACCACCTGA ACAGCGGCAA AGGAATGGCT GGAAGGCTTA TTTCAGATGA AAAAATGGGC
AGTGAACTTG CTGAAACAAT TAACAGTCTG AAAACCACAA CGGCAGAGCT CTCAACACTG
ACAAAGAAGG CCTCCCATGG CGATGGTCTC CTTCCAAGAC TCCTTAATGA CAAGGCATTG
GCGGAAAACA GCAGCGAGAC CATTGAACGT CTCAACCAGG CTGCGTTGAA AACCGAAACA
CTGATCACCA AGCTCAGCAA TGACAACGGA ACCCTTGGCC AGCTCTCTTC CAATCCGGCG
CTCTACAACA ACCTCTCCAG AACGCTTTCA TCGCTTGATT CTGTCCTGGT TGACCTGAAA
GCGAACCCGA AACGCTATGT CAAATTTTCG CTCTTTTAA
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| Protein sequence | MKNPNALKWS DLKTGIFFVF GVCFAAYMGL VIGKNSNLFT GVTNIKILSS DVQSLAENNF
VSVSGKKIGT VSKMDFERRN GTLFVVATLR LKNEFAHLVT KDARATIKSL GILGDKYVDI
KTGKAAAVND GDFISLETED GMANLTASAN NAFVKINELL DHLNSGKGMA GRLISDEKMG
SELAETINSL KTTTAELSTL TKKASHGDGL LPRLLNDKAL AENSSETIER LNQAALKTET
LITKLSNDNG TLGQLSSNPA LYNNLSRTLS SLDSVLVDLK ANPKRYVKFS LF
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