| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2252 |
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| Symbol | |
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| ID | 6461657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2335206 |
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| End bp | 2336000 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728440 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_002019064 |
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| Protein GI | 194337270 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.497149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAT CCTTCATGCG CAATCTGGAA AAAAAGCTTG TCCTGCGACT GAAAGATTTT
TTCCTCACCA TGCAGGATTT TTTTCTCTTT TCGCTCAGGG CGTTTATGGC TATGCCGAAA
ATAAAGCGCT ACTGGAGAGA CTTTCTTGAC CAGGCTGGCA TCTGCGGTAC CGACTCGATT
CCCATTGTAC TGGTCAGCGC CATTTCCATT GGGGCGCTTC TTGCCATCGA AGTTGGGAAC
CTGCTTGAAG ATTTCGGCGC CAAAACAATG CTCGGACGCT CAACCGCCCT CTCCGTAATC
CGCGAACTCG GACCGCTGCT GATGGGCCTC ATGCTCTCCG CACGCTTCGG ATCGAGAAAT
GGTGCTGAAC TCGGCGCCAT GCAGATATCG GAACAGATCG ACGCCCTTCG TGCTTTCGGT
ACCGATCCCA TTGCCAAACT GGTTATGCCG CGCCTTGTTG CTGCACTCAT CATGTTTCTG
CCACTGACCG CGCTTTCCGA CTTTGCCGGA CTGCAAAGCG CAGCCTACAT GGCCGAGCAC
TACCACCGGA TCGACCCTGG AATATTCTGG AACGCTGTTT ATCCCCGGCT TGCACCAAAA
GACTTTGTGG TCGGGTTTCT CAAAGCTCCT GTCTTCGCCA TTATTATAAC GCTGGTCAGC
AGCTTCAACG GCTTTTCGGC AAGGGGAGGT ACCGCTGGTG TCGGGCGTGC CACCATCAAA
GGCATTGTTG TATCATCCGG GCTGGTACTG ATTGCCAATT TCTACGTTTC AAAGATTGTG
CTGGAAAACA TGTAA
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| Protein sequence | MPLSFMRNLE KKLVLRLKDF FLTMQDFFLF SLRAFMAMPK IKRYWRDFLD QAGICGTDSI
PIVLVSAISI GALLAIEVGN LLEDFGAKTM LGRSTALSVI RELGPLLMGL MLSARFGSRN
GAELGAMQIS EQIDALRAFG TDPIAKLVMP RLVAALIMFL PLTALSDFAG LQSAAYMAEH
YHRIDPGIFW NAVYPRLAPK DFVVGFLKAP VFAIIITLVS SFNGFSARGG TAGVGRATIK
GIVVSSGLVL IANFYVSKIV LENM
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