| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2176 |
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| Symbol | |
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| ID | 6461800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2262392 |
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| End bp | 2262958 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728372 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_002018996 |
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| Protein GI | 194337202 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACCA TCATTCAGGG AAAAGCCTAC GTTTTAGGCA AAAATATTGA TACCGACCAG
ATCATTCCAG CCGAACATCT GGTCTACAGC CTCTCCGATC CCGAAGAGGT GATTCTCTAC
GGCAAATATG CCCTTTCAGG AGTACCACCC GAACAGGGAG GGCTGCCCCA GGGCAACATC
CTCTTCATCG AGGAGGGAAG CTGCCACTCA AACTATACGA TCATCATTGC CGGGCCAAAC
TTCGGTTGCG GATCGTCACG GGAGCACGCT CCCTTCGCCC TCAAGGTTGC CGGAGTCAAG
GCCATTGTAG CCGAATCGTA CGCACGTATT TTTTATCGCA ACTGCGTTGA CGGCGGTTTT
GCCATCCCCT ACGAAAGTGC GGAACAACTG AACCAGCTCA TCAAAACCGG TGACGAACTG
AAAATCGACG TCGAAGCCAA CACCATCGAA AATCTGACAA GCAACATCAC CTACAAGCTC
AATCCCCTTG GCGATGTCTT CAATATTGTT GAGGCTGGCG GTATTTTTGC CTATGCCCGT
CAGGAAAATT TAATGCCCCA ACACTGA
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| Protein sequence | METIIQGKAY VLGKNIDTDQ IIPAEHLVYS LSDPEEVILY GKYALSGVPP EQGGLPQGNI
LFIEEGSCHS NYTIIIAGPN FGCGSSREHA PFALKVAGVK AIVAESYARI FYRNCVDGGF
AIPYESAEQL NQLIKTGDEL KIDVEANTIE NLTSNITYKL NPLGDVFNIV EAGGIFAYAR
QENLMPQH
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