| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2145 |
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| Symbol | |
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| ID | 6462530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2224825 |
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| End bp | 2228199 |
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| Gene Length | 3375 bp |
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| Protein Length | 1124 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642728341 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002018965 |
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| Protein GI | 194337171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTTC CAAAATACGA CGAGGCAGAT TTAGAACGGC ACTCAACTGA GCAGACCCTT
CGCTTTCTGT TTAATGCAAT TCCTGAATCC ATGTTCATCA TGGATTGTCA GGGCATAGTG
CTTGAGGCCA ATGAATCTTT CGCGGCACGC TTTGGTAAAA GCCTTTCAGA GTGTCCCGGA
ATAAACGTTT ACGATCTGCT CTCTCCTGAT GTAGCGCTTC ATCGAAGGAA AAAGGTTGAG
GAGGTATTGC GTACTGGCAA ACGCCTCTCT TTCGAGGGAG AGTTGGAGGG GGATCGTCTG
CTTCAGGGCA GAAAGATGCA CCATATCTGT CCTCTTTTTG GCTCAGTCGG AGAGGTCGAT
CGGCTGGTTG TCTATTCACA GGATATTACG GAACTCAAGC GTACGGAAGA GAGTCTGATA
GCAGCGCAAA CTGTTCTGGA CAAAGATCTT GAAGCGATGT CAAAACTTCA TGAAATTTCC
ACACTTTTTG TTCGCAAGGG TAATGTAGAG GGGATTTTTG ATAAAGTCAT TGATGCGGCA
TGTGCCATTA CAGGCTCAGA CATGGGTTCT GTGCGTCTTG TCGATGCAAA ATCAGGCCAC
CTGAAAATCG CTGCCCAGAA AGGTTTTACC GATCCCTTTC AGGAATGCTG CCATGATTCT
GCAGTCGGGC CCTGTGTATG CGACAGGGTC ATGCGAAGAA AAGAGCAGAT TATGGTGGCG
GATATAACGC AAAGTACGCT CATCTGGGGC AAAAAAGAGG TTGAAGCGCA TCTTGCTGAC
GGAGTACGGT CACTGCAATT AACGCCAATG GTCAACCGTA GTGGAAAGTT GCTTGGCATA
CTCTCCACCT ATTTTCCTGT CGTCTATCAC CCTGAAGAGA GGGTTCTGAA ACTGCTGCAT
CTGCTTGCCA GTCAGACCGC AGACATTATC GAAAGGGCAG AAAAAGAGGA GGCATTACAA
CAAAGCAATG AGCGTTATCG CTCCCTTTTC AGTAACACAC TGAATGCTAT TGCCTATTGC
CGGATGATTT ATGAGGAGGA GCGTCCAGTC GATTTTATCT ATGAACAGGT TAATGTGCGC
TTCGAAAAAG TGACCGGTCT GAAAAATGTT GAGGGCAAGA AGATTTCAGA GGTGATTCCC
GGTATTCATG ACATCAATCC CGAGCTTTTG AAGATCTTCG GGCGGGTAGC AAAAACCGGT
ATAACAGAAC GGCTTGAATT TTATCTGGAA TCCCTGAAAA CGTGGCTTGA TATTTCGGTA
TACAGTACAA AATCTGGTCA CTTCGTTACC GTCTTTGATG TCATCACTGA ACGCAAGCAG
ACGGAAAATG CCTTGCTTGA GAGTGAAAAA AAGTTTCGCT CCATTACAGA ACAAATGGCA
GAGGTGGTTT TTGTCACCGA CAATTTTGGC CATCTAACCT ACGCATCATC AGCAATTGAA
AAAATCTTCG GCTATACCTC TCAAGAGGTT ATTGGTCATT TATTTACTGA ATATCTTGTA
GAAAACGAGA TTTCTCGAGC GCTTGCCATT TTCAATGAGG CCTTGTTGAA TCAGTTGACG
CTCCAGATTC TTGAATTCAA ATACCAGAAA AAAAACGGAG CAGTCTTTTG TGGGGAAGTA
CATCTGCACT ATTACTATGA CAACGGCTCT TTTGGTATTA TTGGCCTGAT CCATGATATC
ACGGAGCGAA AGCGTAATGA AGCGGTTATT GCATTTCGCC TGCACCTGCT TTTGCTCGCT
GACTCCTATT CCATTGAAGA GGTGCTTCGC GAAACACTTG ACGAAGCGGA GAGGCTGACA
GGAAGTACCA TTGGCTTTAT TCATTTCATC GAACCAGACC AGATCAGCAT TTCATTGCAG
GCATGGTCAA CCAATACCGA AAAGAATTTG TGCCTGGTAG AAGATGGTTT TCGCCGCCAT
TATCCACTGA AGGATGCCGG GGTCTGGGCT GACGCCATTC GTGAACGTCG GGCGATGATC
CATAACAATT ACGACGCCCT CTCAAACCGG AAAGGGATGC CGCAAGGTCA TATTGCCGTT
GAGCGTGAGC TGGTTGTTCC TATCATGCGT GGTGAGAAAA TCACCGCCAT TATTGGTATT
GGCAATAAAG TGGTCGATTA CGATCAGGAA GATGTGAAGC TTTTGTCCTC CATGGCTGGT
ATTGCCTGGG ACATTATTGC CCGAAAGAAG GCCGAGTTGT CGGAAAGCAG AATTCAGAAC
GAGCTGGTCA AGGCGCAGAA AATGGAGCTT GTTGGCAGGC TGGCTGGTGG TATCGCTCAT
GATTTCAACA ATATGCTTTG TGTGATTCTT GGTCATGCAG AAATGGCCCT GCTCGATAAT
CAGCTCAATG AATCACTCAG GGAAAGTCTT CAGGAAATTT TCAACGCAGC AGAAAAATCT
GCCGACCTTA CCCATCAATT ACTTGCGTTT GCCCGAAAAC AACCCCTGAT TCCGAAGGTT
CTTGACCTTA ATGTTGTTAT TGAGGGTATG CTCAACATGC TCAGACGGCT CATTGGTGAA
GATATTACTC TGGTTTGGAG TCCAGAAAAA CTCCTCTATC CTGTAAACAT GGACTCCTCC
CACATTGACC AGATTCTCAT CAATCTTTGC GTTAACGCCC GTGATGCCAT AACGGAAATC
GGAAAAATCG TTATTGAGAC CAAAAATGTT ATGCTTCATG AACCCTATGC TGTCGATGGG
GAAGTTGGTT CTTCAGGTGC ATATGTTCTT CTCTCAGTGA GTGATAATGG CAGGGGTATA
GAAGAAAAAG ATGCTGGATA TATTTTCGAG CCATTTTTTA CGACAAAAGA GTCCGGGAAA
GGTACTGGTT TAGGGTTGTC GACGGTTTAT GGTCTTGTGA AACAGAATAA TGGCTTCATC
AGGTTCTCCA GTGAACCGGG TAAAGGAACG GAATTCAGTG TCTATTTCCC GGGATATACC
GGTGAGGCTT TTTCGTCCAA GAGAGAATTG CCAGCAGAAA AGGTCAAGCC TGGTGAGGAA
ACCATACTCA TCGTTGACGA CGAAAATGAG ATTTTGAAAT TGAGTAAAAT GATTTTGCAA
AATCAGGGCT ACCACGTCCT GACTGCAGGC ACTCCTGCGC AAGCCATCCA GATTGCCCAA
GGGTACAAGG GAGAGATTAA TCTTCTGCTA ACAGACATTA TTATGCCTGA AATGAATGGT
CGTGATCTTT CCGAAAAAAT TTACTCGATT TTTCCCAACA TCAAGGTGCT TTTTATGTCG
GGATATACTG CCGATATTAT CGCCAGTCAG GGAGGAGTTG ACGAGGTTAT GAATCTTATT
CTGAAGCCAT TTTCCATAAA AGGATTGACA AATAAAGTCT ACGATACGCT GCATGTTTCG
CATCCCAAAG TGTGA
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| Protein sequence | MDLPKYDEAD LERHSTEQTL RFLFNAIPES MFIMDCQGIV LEANESFAAR FGKSLSECPG
INVYDLLSPD VALHRRKKVE EVLRTGKRLS FEGELEGDRL LQGRKMHHIC PLFGSVGEVD
RLVVYSQDIT ELKRTEESLI AAQTVLDKDL EAMSKLHEIS TLFVRKGNVE GIFDKVIDAA
CAITGSDMGS VRLVDAKSGH LKIAAQKGFT DPFQECCHDS AVGPCVCDRV MRRKEQIMVA
DITQSTLIWG KKEVEAHLAD GVRSLQLTPM VNRSGKLLGI LSTYFPVVYH PEERVLKLLH
LLASQTADII ERAEKEEALQ QSNERYRSLF SNTLNAIAYC RMIYEEERPV DFIYEQVNVR
FEKVTGLKNV EGKKISEVIP GIHDINPELL KIFGRVAKTG ITERLEFYLE SLKTWLDISV
YSTKSGHFVT VFDVITERKQ TENALLESEK KFRSITEQMA EVVFVTDNFG HLTYASSAIE
KIFGYTSQEV IGHLFTEYLV ENEISRALAI FNEALLNQLT LQILEFKYQK KNGAVFCGEV
HLHYYYDNGS FGIIGLIHDI TERKRNEAVI AFRLHLLLLA DSYSIEEVLR ETLDEAERLT
GSTIGFIHFI EPDQISISLQ AWSTNTEKNL CLVEDGFRRH YPLKDAGVWA DAIRERRAMI
HNNYDALSNR KGMPQGHIAV ERELVVPIMR GEKITAIIGI GNKVVDYDQE DVKLLSSMAG
IAWDIIARKK AELSESRIQN ELVKAQKMEL VGRLAGGIAH DFNNMLCVIL GHAEMALLDN
QLNESLRESL QEIFNAAEKS ADLTHQLLAF ARKQPLIPKV LDLNVVIEGM LNMLRRLIGE
DITLVWSPEK LLYPVNMDSS HIDQILINLC VNARDAITEI GKIVIETKNV MLHEPYAVDG
EVGSSGAYVL LSVSDNGRGI EEKDAGYIFE PFFTTKESGK GTGLGLSTVY GLVKQNNGFI
RFSSEPGKGT EFSVYFPGYT GEAFSSKREL PAEKVKPGEE TILIVDDENE ILKLSKMILQ
NQGYHVLTAG TPAQAIQIAQ GYKGEINLLL TDIIMPEMNG RDLSEKIYSI FPNIKVLFMS
GYTADIIASQ GGVDEVMNLI LKPFSIKGLT NKVYDTLHVS HPKV
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