Gene Ppha_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2135 
Symbol 
ID6462621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2218252 
End bp2219493 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content43% 
IMG OID642728333 
ProductRES domain protein 
Protein accessionYP_002018957 
Protein GI194337163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAG TAAAGAAAAT GTGGGAAGAA GCCATGGAGC GCGGCTATTA TGTTGATGAG 
GAAATTGTTG TATGTCCTCA TTGTTTCGAA GAAGAATCGC TACAGGATTT CATCAGAAGC
CGAGGTGGAA AGTCCCCCTG TACATATTGT GGAGCCGTTG CCGAAGGTAC CTGTATGCTT
GATGAGTTGC TGAATCATGC AATGGATTGC ATTAGGACAG AATGGAGACA CCCAGCGGAC
GAAGGGCTGC CTTGTGAAAC AAGAGAAGGT GGATGGCAAT TCGCAGAAGT AATTGGCACG
CAAGAGTTGT TTGAACGAGT AGGTTTCTAT GCATTGAACG ACGATTTGCA AAATAAAATA
AACACCACCG TAGATGATGA TGAGTGGTGC GAACGCAGTC CGTATTTACT CCGTAGAGAT
CAGACCCTTT TGTATGGATG GAAAGAGTTC TCAACGTTCG TTATGCATGA AGCCAGATAC
GTTTTTTTGA ATGCAACACC TGAGAGCTAC GATGATTCAA GGCCTGATGA AATCCATCCA
GTCAAAATTC TTGACGCACT TGCAAACCTG GCTGAGGAAA TTGGCCTAAT TGGCAAAATT
GAACCAGAGA CCAGTTTATA TCGTGTACAC ATCGTAGATC AAAGTGAATC TCTTACGTCA
GCCAAACGAC TCGGCTCCCC TCCACTTGAT CAGGCATTAT ATTCAAACAG GATGAGCCCG
GCAGGGATAT CAATGTTTTA TGGCGCATTG GATATGAATA CCGCTATTCT TGAGATATTT
GACCCATGCA AAGGGAACAG GAAAAAAGCC GCTTACGGTA TTTTTTTCCC TGTGCGACCA
TTGCGAGTAC TGGATCTTTC AAAGATACCT GATGTGCCCA GTATATTTGA TTTGGCAAAA
CATAACATTC GACCAGGAAT TATGTTCTTG CATGATTTTC TTCGAGATTT TACCAAACCT
ATTTCAAAAG ACGAAAAAGC TCATGTAGAA TATGTTCCCA CTCAAGTTGT AACAGAATAT
TTCCGTCATA TTTTTCGTAC AGCAACCGGG GAGCGACTGG ATGGAATAAT GTACCCAAGT
TCCAAGCATG AAAACCAAAC GGCCGTCGTA ATCTTTGCAA ACAACGATGC CTGCGTCGAG
GCGGGAGACA TTTCGCTACC CAATGCTCTG CTCGTCCTCA GAAGCTATGG AATTACGGAA
CTGGTGAAAA CCCTTCCAAC AACCTTGAAA AAATTAATTT AG
 
Protein sequence
MGQVKKMWEE AMERGYYVDE EIVVCPHCFE EESLQDFIRS RGGKSPCTYC GAVAEGTCML 
DELLNHAMDC IRTEWRHPAD EGLPCETREG GWQFAEVIGT QELFERVGFY ALNDDLQNKI
NTTVDDDEWC ERSPYLLRRD QTLLYGWKEF STFVMHEARY VFLNATPESY DDSRPDEIHP
VKILDALANL AEEIGLIGKI EPETSLYRVH IVDQSESLTS AKRLGSPPLD QALYSNRMSP
AGISMFYGAL DMNTAILEIF DPCKGNRKKA AYGIFFPVRP LRVLDLSKIP DVPSIFDLAK
HNIRPGIMFL HDFLRDFTKP ISKDEKAHVE YVPTQVVTEY FRHIFRTATG ERLDGIMYPS
SKHENQTAVV IFANNDACVE AGDISLPNAL LVLRSYGITE LVKTLPTTLK KLI