| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2134 |
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| Symbol | |
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| ID | 6462639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2215325 |
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| End bp | 2218108 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728332 |
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| Product | helicase domain protein |
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| Protein accession | YP_002018956 |
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| Protein GI | 194337162 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCGG AGCTGCAATT TCTGCCCGGT GAACGGATAG TCCATAGTGA ATTCGGTCAG
GGGGTCATTC TTGAACCGGT TCGGGACGGT TACCTGCGCG CCTTCTTCGG TATCGGTGAG
CGCCGTGTTC CTGTTGGTTC AATACGTCAG GAACTCTCGC GTCTTGAGCG CATCCTCCGT
GCCGTCGATA ATGGTGCTGA TCGAGCCAGT AAGGCATGGC TCTCCTATGA AGCACATGCC
TTGCCCATTA TGGAAAGTGC TTCGGCCCTC ACCTCCGCCC GAATTGACCT GTTGCCTCAT
CAGGTTGTAC TCACACACCG CATCGCCACC GCATCGCCAC GGCGTTTCCT CATCGCCGAT
GAAGTAGGAC TGGGAAAAAC CATCGAAACA GCGCTCATTC TCCGCGAACT GGCCAGCCGA
GGTGAACTCG ATCGTGCGCT CATGGTTGTT CCTGCAGGTC TGGTCAACAA CTGGCACCGG
GAACTGAACG AGGTATTCAA TCTTGGTTTC GAAGTATTCG GCTCCGAAGG TGATATTACC
GATCGCAAAA CAAACGCCTT TGCAAAACAT GACCGACTCA TCGCCAGCGT TGACACTCTC
AAGCGTCCGG CACGTATCCG GCGCCTTCTC GACGCCCCAC GTTGGGATCT TGTCGTTTTC
GACGAAGCGC ATCACCTGTC GGCATCCCGC AACGGTGGAA AGGTCAGAAA AACCGAGAAC
TATAAGCTCG CAGAAGCTCT CAAAGATCAC TCACGGGATC TCTTGCTGCT CTCAGCCACT
CCGCACCAGG GCAATCACTT CCAGTTCTGG ATGCTGGTAC AACTGATGAA TCCGACACTC
TTCGCCAACC CTGAAGATAT GCTCGGCAAT CGCCATCGCC TCAACACGGT CATGTTTCGC
CGCTCTAAAG CCGATGCCTG CCAGCCGGAT GGCTCACCAC TCTTCGCTCG TCGCTGTGTG
CATACCGAAT CGTTCCTGAT GAATCTCGAC GAACGCCGCT TCTATGAAAA GCTGCGCGAA
TACCTTCAGG ACGGTTTTAA CCTCGCCCGG CGCCAGGGTA ATCAGGGTCG CGCACTTGGA
TTTCTCATGG CGATCTTTCA GAAAATTGCT GCATCCAGCT TTGCTGCGGT ACGCCGTACT
CTCAAACGGC GCCTCTTGAT GTTGACACTG CACGAAGCCC ACCTTAGAGA TCGGGAACTC
GACATCGAGG GGAGAGAACG ACTCATCAAT GAAGCACGGG AACTCATCCA TGAAGAATTC
GCTCTGTCGC ATGACAGCAT GGGGCGCAGT GAAGTAGACC GGGTGCTTGC CGATCTCAAA
TACCGCTTGC TCAAAAAGCT CGACAAGGAC GCTCTCGAAA TGGCCGCTGA TCCCTATGGC
AGCGAATATG CATCGACGCA TGCTGAAGAG GCCGCTGCCG CTGCCGTAAA CCTGCATTTA
CCGGAAGAAC GCCAGCGCAT TGTCGAGCTT CTCGGCGCTT TTCCGCAACA GCGCGAAACC
AAGGCACAAA AACTCCTTGA TGGTCTTGGA ACACTATGGC GGCAGAACCC CGACGAAAAG
ATCGTCGTTT TCGCCACCTA TCTCGGTTCC GTCGACCTGA TTGCCCGTGA GATCAACCAG
ACCTTTCCCG GCCAAGGGGT AGTCATACTG CGTGGCGGAG ACCACGGAGC CAAAGTTGCC
GCCGAACGGC GTTTCCGTCA AAAGGACGGT CCCCGTGTCC TCGTATGCAC TGCGGCAGGC
AGAGAAGGCA TCAACCTCCA GTTCTCCCGT ATTCTTTTCA ACTTCGACCT GCCCTGGAAC
CCTATGGACG TGGAACAGCG CATCGGACGC ATCCATCGTT ACGGTCAGAA CTACACCGCC
CAGGTGTACA ACCTTGTACT TTCCGATACC ATCGAAGGCC GGATATTCCT CATGCTCGAT
GAAAAACTCA CCGAGATAGC CCGTACAGTC GGCAAAGTTG ACGATCAGGG TAACGTCGCC
GAAGACCTTC GGACTCAAAT TCTTGGTCAA CTCTCCGAAC GCCTCAATTA CGACCGCCTC
TATCAGGAAG CGCTGTCCGA CCCTGAACTC AAACGAACAC AGATCGAACT CGAAGCCGCC
ATGTCGAACT CCCGGGAAGC CCGGCAGGTC GTTTTCAACC TCTTTCAGGA TCTCGATGGA
TTCAGCCTTG ACGACTACAA ACCATTCTCC GATGTCTCCT CAAGTCTTGA CCGAATCGTT
CGCTTTCTCT CCGCCGCCCT TCTCGAACGC CAGCAAAAAC TCGTCAGAAT CGATGAACAG
ACATACGACC TCATCGCGGA AGATGGTAAC CGACAGGTTC GATTTACCCT GAACCGTAAT
GCCGCCACCG CTCAGGACGA ACTCGAACTC CTTGGACTCG ATCACCCCAT TATCCAATCA
GAACTAACCA GATGGCGAAG CCTGCCACCT GAAGCCATTG GTATAGCAGT TACTGCTGAT
CTCGACGCCC CGGCTCTCCT TTCGATCTGG ATCGTTGAAA CCACCACAGG TAATGGTGAC
CGCCGTATCG TCATTCAACC TATAGCCATT ACACTGGACG GCATAAGGGT TCCCGCCATT
GAACGTCAAG GTGGACACTA CCTGCAGGCC ACTCCAGCCC GGCCTTGGCT TTTGCCTGAA
CAACGCTTTG AAATTTTCTC CCGTATAGTC GAACCAACCC TTCAACGAGA GCTTAAACAC
AAAGGCACCA CCAACGGCGA CAGCAGCTAT TCTGCCGAAT TGATTGCCTA TGTTGAAATA
AGCACCGGAA AAATTCATGG TTGA
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| Protein sequence | MESELQFLPG ERIVHSEFGQ GVILEPVRDG YLRAFFGIGE RRVPVGSIRQ ELSRLERILR
AVDNGADRAS KAWLSYEAHA LPIMESASAL TSARIDLLPH QVVLTHRIAT ASPRRFLIAD
EVGLGKTIET ALILRELASR GELDRALMVV PAGLVNNWHR ELNEVFNLGF EVFGSEGDIT
DRKTNAFAKH DRLIASVDTL KRPARIRRLL DAPRWDLVVF DEAHHLSASR NGGKVRKTEN
YKLAEALKDH SRDLLLLSAT PHQGNHFQFW MLVQLMNPTL FANPEDMLGN RHRLNTVMFR
RSKADACQPD GSPLFARRCV HTESFLMNLD ERRFYEKLRE YLQDGFNLAR RQGNQGRALG
FLMAIFQKIA ASSFAAVRRT LKRRLLMLTL HEAHLRDREL DIEGRERLIN EARELIHEEF
ALSHDSMGRS EVDRVLADLK YRLLKKLDKD ALEMAADPYG SEYASTHAEE AAAAAVNLHL
PEERQRIVEL LGAFPQQRET KAQKLLDGLG TLWRQNPDEK IVVFATYLGS VDLIAREINQ
TFPGQGVVIL RGGDHGAKVA AERRFRQKDG PRVLVCTAAG REGINLQFSR ILFNFDLPWN
PMDVEQRIGR IHRYGQNYTA QVYNLVLSDT IEGRIFLMLD EKLTEIARTV GKVDDQGNVA
EDLRTQILGQ LSERLNYDRL YQEALSDPEL KRTQIELEAA MSNSREARQV VFNLFQDLDG
FSLDDYKPFS DVSSSLDRIV RFLSAALLER QQKLVRIDEQ TYDLIAEDGN RQVRFTLNRN
AATAQDELEL LGLDHPIIQS ELTRWRSLPP EAIGIAVTAD LDAPALLSIW IVETTTGNGD
RRIVIQPIAI TLDGIRVPAI ERQGGHYLQA TPARPWLLPE QRFEIFSRIV EPTLQRELKH
KGTTNGDSSY SAELIAYVEI STGKIHG
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