Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2123 |
Symbol | |
ID | 6462707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2203713 |
End bp | 2204186 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728322 |
Product | putative transcriptional regulator |
Protein accession | YP_002018946 |
Protein GI | 194337152 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGA TGCGCCAGGG TAATGTATCA CGCCGCCGCA ACCCATTGAT TGCCGACCTT TTCCGCCGTA TCCAGATGGT TGAAGGGTGG GGGCGTGGAA TGCCGCTCAT TTTTGAAAAT GCACCGAGCG TGCAGTTTCG CCAGATTGCC GGTTTGTTCA TAGCAAGTTT TGAAAGGCCC TCTTTTGTTG AGGATTTCGT ACAGGGCGAA GTTGATACTA CAGGAAAGAC TGTCGATAAG ACTGTCGATA AGATTGAGCT GACCGATAAG GAAAAAGATT TGTGTGATTT GGTTCGCCAT CATCCAATCA TCACTCAAAA AGGGATGGCA GATCAACTTG GTCTTACCGA ACGAGGTATT CGTTACCTGA CCGACAAGCT TCAGAAGCAA GGTGTTCTTC AAAAAATCGG GGGCAAAAAG TCTGGAAAAT GGGTGGTTAT TGATTCGACA AAATCAGGGA GTGCTGGGGT ATGA
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Protein sequence | MEEMRQGNVS RRRNPLIADL FRRIQMVEGW GRGMPLIFEN APSVQFRQIA GLFIASFERP SFVEDFVQGE VDTTGKTVDK TVDKIELTDK EKDLCDLVRH HPIITQKGMA DQLGLTERGI RYLTDKLQKQ GVLQKIGGKK SGKWVVIDST KSGSAGV
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