Gene Ppha_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2121 
Symbol 
ID6462713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2202768 
End bp2203220 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID642728320 
Productprotein of unknown function DUF1016 
Protein accessionYP_002018944 
Protein GI194337150 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCT TTTATCGAAA GTATCCGGCC TCCCAGACAA TTTTGCCACA GGCTGTGGCA 
AAATTACCGG AGCAGCCTTT GCTTGCAGGT ATTCCCTGGG GTCATCACTG CCTGTTGCTT
GAAAAAATCA AGGATATACC GGTTCGATTC TGGTACATGG AGCAGACTGC AAAAAACGGC
TGGAACCGCG ATACCCTTGC CGCAATGATA AAAAGCGACC AGTATAGCCG TCAGGGTTCA
CTGGCCAACA ACTTCGGCAA AACGCTGGCC ATGCCACAAT CCGAACTGGT ACGGCAGGCA
TTGAAAGATC CCTATATTTT TGATTTCCTT ACACTGACAG AACCATTTGC CGAGCGGGAA
CTGGAGACTG AGCTGATCAT TTGCGGTTAC GCTGTTTCAT TGTCATCGAA CTCAAAAAAG
GTGAGTTCAA ACCGGAATAT GCCGGAAAGA TAA
 
Protein sequence
MIAFYRKYPA SQTILPQAVA KLPEQPLLAG IPWGHHCLLL EKIKDIPVRF WYMEQTAKNG 
WNRDTLAAMI KSDQYSRQGS LANNFGKTLA MPQSELVRQA LKDPYIFDFL TLTEPFAERE
LETELIICGY AVSLSSNSKK VSSNRNMPER