Gene Ppha_2107 details

Gene Information

• Locus tag: Ppha_2107
• ID: 6462736
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 2191910
• End bp: 2192353
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642728307
• Product: protein of unknown function DUF296
• Protein accession: YP_002018931
• Protein GI: 194337137
• COG category: [R] General function prediction only
• COG ID: [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.971828
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATA CAGAAGCAAA GCAGGGAAGA GTTTTTGTCA TCAGGCTCGA AGACGGAGAG 
ATCGTCCATG AGAGAATAGA GCAGTTCGTA AAGGATCATG GCATTGAGCG TGCAACCCTT 
TTTGCGGTCG GAGGAGCTGA CAAGGGCACT CTCCTTGTGG TCGGACCCGG AGAAAGCCGC 
TCAAATCCCG TAAAACCCAT GATTCATGAA CTTGACGACG CTCATGAAAT CACGGGCAGC 
GGAACTCTTT TTCCTGATGA TCATGGTAAC CCGATTCTCC ATATGCATAT GGCATGTGGC 
AGGGAGGAAA ACACCGTTAC GGGCTGTATT CGTAACGGTG TAAAGGTATG GCAGGTGATG 
GAAATTATCC TGACAGAACT GCTTGAATGC ACGGCAAGGC GTCTGTATGA TCCCAACACC 
GGCTTCAAGC TGCTTGCCCC CTGA 

 

Protein sequence

MKYTEAKQGR VFVIRLEDGE IVHERIEQFV KDHGIERATL FAVGGADKGT LLVVGPGESR 
SNPVKPMIHE LDDAHEITGS GTLFPDDHGN PILHMHMACG REENTVTGCI RNGVKVWQVM 
EIILTELLEC TARRLYDPNT GFKLLAP