| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2071 |
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| Symbol | |
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| ID | 6462813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2159925 |
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| End bp | 2160614 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728265 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002018895 |
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| Protein GI | 194337101 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGCA TTGCGGCTAA CATAGAAACA ATACGGGAGC AGATTCATGC GGCCTGCATC
GAGGCAGGCC GCGATCCGGC TGGAGTACGT CTGATCGCTG TTTCAAAAAC CCACCCGGCA
TCACTGATAA AAGAGGCCTT TGATGCCGGT CATATTGTTT TCGGAGAAAG CTATGTCCAG
GAGTTTCTGG AAAAGTGTGA AGATCCCCTG CTTGCACAGC TCGGAATCGA ATGGCACTTT
ATCGGACACC TGCAGTCAAA CAAGATACGC TCGATTATCG GCAAGGTGAG CCTTATTCAT
GGCATCGACA AGCTCTCAAC AGCCGAAGAG CTCTCAAAAC GAGCCCTCCG GAACAACCTG
CAGGTCGATT ATCTTCTTGA AGTCAATACC TCCGGCGAAG CATCCAAATA TGGCATGTCG
CCAGAAGAGC TGCTTTCACT GGCTGAATCG CTCTTCACGC TCCCGAACAT CACCCTTCGC
GGCCTGATGA CCATCGCGTC ACCAGACAGG GTTCTTGCAC AACAGGAGTT TCGCCTGCTG
CGCACCCTTC TGGACGCGCT GAAACCCATT TCTCCGGATC CATCAAAACT TACCGAACTC
TCCATGGGCA TGAGCGGCGA TTTCAGGGAA GCCATTCATG AGGGAGCAAC CATGATCCGT
GTCGGAACGG CAATCTTCGG CTGGCGCTGA
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| Protein sequence | MDSIAANIET IREQIHAACI EAGRDPAGVR LIAVSKTHPA SLIKEAFDAG HIVFGESYVQ
EFLEKCEDPL LAQLGIEWHF IGHLQSNKIR SIIGKVSLIH GIDKLSTAEE LSKRALRNNL
QVDYLLEVNT SGEASKYGMS PEELLSLAES LFTLPNITLR GLMTIASPDR VLAQQEFRLL
RTLLDALKPI SPDPSKLTEL SMGMSGDFRE AIHEGATMIR VGTAIFGWR
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