Gene Ppha_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2006 
Symbol 
ID6462955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2093813 
End bp2094499 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID642728205 
Productconserved hypothetical protein, membrane 
Protein accessionYP_002018835 
Protein GI194337041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTGCCGCGAT ACTCATTGCC GCCCACTTCA TAGGTGACTA TTTCCTCCAG 
CCAGACAAAA TGGTTCGGAA CAAACGGCTG CCCCTCATGC TCATCCTGCA TGGAGCCATA 
CACGCCGGAA CCACCTGGCT GCTGCTCCAG CTCTGGCATA ACTGGCAGGC GCCCCTCGCG 
GTTTTCCTCC TTCATACCAT CATTGATCTC ATCAAACAAC GGCTGGGAAA GGCGAACACC 
GCCACCTTTA TTACCGACCA GACTGCTCAC CTCTTCAGCC TTCTCATGCT TGCCATGCTC 
CTTTCCCAGG GAGCGAATGG GGCCACATTT ACCGGTTTCG GATATCAGCT CATGATCGGG 
TTTGCAGGCT TTATTGCAAC GGTAAGAGGA GCCGGTTTTC TCGTCACCTT CATAACCAGA 
GAGCTGACGA TCAAAAACAA TCTCAGATTT GAGGGGCTGC AAAACGGAGA GACGCTCATT 
GGTCAACTGG AACGGGGGCT GATCTTTCTC TTTTTTCTGG CAGGCCACCC GGAAAGCATC 
GGCTTCCTGC TTGCAGCCAA ATCAATCCTG CGATTTGAAG AGTCAAAAAA AGCCAAGCAG 
GGAGAATACA TTCTTATCGG TACCCTGCTC AGCTTTTCGG CAGCCATAGC GCTCTCCTCC 
GCCACACTGT GGGCCATGCG GCTCTGA
 
Protein sequence
MEKIAAILIA AHFIGDYFLQ PDKMVRNKRL PLMLILHGAI HAGTTWLLLQ LWHNWQAPLA 
VFLLHTIIDL IKQRLGKANT ATFITDQTAH LFSLLMLAML LSQGANGATF TGFGYQLMIG 
FAGFIATVRG AGFLVTFITR ELTIKNNLRF EGLQNGETLI GQLERGLIFL FFLAGHPESI 
GFLLAAKSIL RFEESKKAKQ GEYILIGTLL SFSAAIALSS ATLWAMRL