| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1996 |
|---|
| Symbol | |
|---|
| ID | 6462984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2083393 |
|---|
| End bp | 2083824 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642728195 |
|---|
| Product | TOBE domain protein |
|---|
| Protein accession | YP_002018825 |
|---|
| Protein GI | 194337031 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3585] Molybdopterin-binding protein |
|---|
| TIGRFAM ID | [TIGR00638] molybdenum-pterin binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTACT GTACCATGAA TAAACTCTCT GTCCTCATTA CTGGCATAGA TCAGCGGGAA
TCACTCTGTT TTCTTGAACT CAATGCATCA GGCATAGAGC TTGGAATGCT GCTGTTTGAC
CTGCAGCCGT TTTTCAGGAA AGGGTGCAGG GTAAATGTTC TTTTTAAGGA AACCGAGGTT
GCCCTTGCAA AGGGGCTCAT GGGAGAAACA AGTTTCAGTA ACAGCTTTCC TGCTGCAGTC
ACAAAAATAA GAGCAGGCTC TCTCCTTGCC GAGATCACCC TTCAATGCAG TGCAGGGGAG
ATCGTGAGTA TCATTACAGC GAAAGCTGCA GAACGGCTGG GGCTGCAGGA AAAAGATGAC
GTTACGGTAT TGATCAAGGC AAGTCAACTC TCGCTTGAGC TGCTTCATAA CGAACATTCC
GCTAAACGAT GA
|
|---|
| Protein sequence | MAYCTMNKLS VLITGIDQRE SLCFLELNAS GIELGMLLFD LQPFFRKGCR VNVLFKETEV
ALAKGLMGET SFSNSFPAAV TKIRAGSLLA EITLQCSAGE IVSIITAKAA ERLGLQEKDD
VTVLIKASQL SLELLHNEHS AKR
|
|---|
| |