| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1956 |
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| Symbol | |
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| ID | 6463072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2044340 |
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| End bp | 2045611 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728159 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_002018789 |
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| Protein GI | 194336995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGA AATTAGCAAA CCACCCCTGT TTCAACGATG CGTCGCGCCA CAAATTCGGG
CGTATCCACC TCCCCGTTGC ACCGAAATGC AATATCCAGT GCAACTACTG CAACAGGAAA
TTCGACTGTA TGAACGAAAA CCGTCCCGGC GTGACGAGCA AGATCCTCTC GTCAGGTCAG
GCCATGCACT ATCTTGATCA GGCAATGATC CTCTCACCGA ACATTGCCGT TGTGGGCATT
GCCGGTCCGG GAGATCCCTT CGCCAATCCG GATGAGACAA TGGAAACCCT TCGGCTGGTT
CGGGCAAAAT ATCCCGAAAT GCTGCTCTGC ATGGCAACCA ACGGACTCGA TCTGGCGCCA
TATATCGATG AGCTTGCTGA ACTGCAGGTA AGCCATGTCA CCATTACCAT CAATGCCATT
GACCCGGTTA TCGGATCGGA AATCTACGCA TGGGTACGGC ACAACAAAAA AATGTACCGC
GACCTTGATG CGGCAAAACT GCTGATCGAC AAACAGCTTG AAGCCCTGAA AAAGCTCAAG
GCGGCAGGAA TCACCGCCAA AGTGAACTCC ATTATTATTC CGGGTATTAA CGATAACCAT
GTCATTGAGG TCGCACGGAA AGTGGCTGAA CTGGGCGCCG ATATCCTGAA CTGTATGCCC
TATTACAGCA CGACTGAAAC CGTATTTGAA AATATTGCCG AACCATCTCT GGATATGGTC
AGCGAAATTC AGAGTGCGAC AAGCGAATAT CTGCCACAGA TGAAACACTG CGCCCGCTGC
CGCGCCGATG CAGTCGGCAT TATCGGCGAA ATCAACAGTG AAGAAATTAT GCAGAAACTT
GCAGAAGCTG CTGCACTGCC TAAAAATCCC GATGAGATAC GCCCCTATAT CGCCGTCAGC
AGTATAGAGG GGGTACTGAT CAACCAGCAC CTTGGCGAAG CGGATCGCTT TCTCATCTAT
GGCATGGACG ATACCGGAAC ATGCGTACTT GTCGATTCAA GAACCGCTCC TCCTCCCGGC
GGCGGGCAGG AGCGGTGGGC AGCACTGGCC GATACCCTGA AAGACTGCCG GGCGCTGCTT
GTCAACGGAG CAGGCGACTC GCCCACAAAA GTGATGAAGG CCAACGGGAT TGAGGTCATG
GTTCTTGAGG GGGTCATTGA GGAGGCAATC TACGGCCTCT TTAACGGTCA GGATCTGAAA
CACCTGATGA AAAGCAGCCA GATCCATGCC TGCGGATCAA GTTGCAGCGG CACCGGCGGA
GGATGCGGAT AA
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| Protein sequence | MTLKLANHPC FNDASRHKFG RIHLPVAPKC NIQCNYCNRK FDCMNENRPG VTSKILSSGQ
AMHYLDQAMI LSPNIAVVGI AGPGDPFANP DETMETLRLV RAKYPEMLLC MATNGLDLAP
YIDELAELQV SHVTITINAI DPVIGSEIYA WVRHNKKMYR DLDAAKLLID KQLEALKKLK
AAGITAKVNS IIIPGINDNH VIEVARKVAE LGADILNCMP YYSTTETVFE NIAEPSLDMV
SEIQSATSEY LPQMKHCARC RADAVGIIGE INSEEIMQKL AEAAALPKNP DEIRPYIAVS
SIEGVLINQH LGEADRFLIY GMDDTGTCVL VDSRTAPPPG GGQERWAALA DTLKDCRALL
VNGAGDSPTK VMKANGIEVM VLEGVIEEAI YGLFNGQDLK HLMKSSQIHA CGSSCSGTGG
GCG
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