| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1952 |
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| Symbol | |
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| ID | 6463080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2038466 |
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| End bp | 2040100 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728155 |
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| Product | nitrogenase molybdenum-iron protein alpha chain |
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| Protein accession | YP_002018785 |
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| Protein GI | 194336991 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0543638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCGA ACAGAGTTTA TCCGGATCCT TCCCAGGTCA GGGAGGAACT GATACAAAAA
TATCCGGCCA AGGTTGCAAA AAAACGGGCC AAGTCGATCA TCATCAATGA CCCGGAGATC
ATTCCTGAGG TGCAGGCCAA CGTGCGTACC GTACCGGGTA TCATCACACA GCGCGGCTGT
TCTTATGCTG GATGTAAAGG TGTTGTGCTC GGCCCTACCC GTGATATTGT CAACATCGTA
CACGGACCAA TCGGTTGCAG CTTTTATGCC TGGTTGACCC GCCGGAACCA GACCAGACCC
GAGACCTTGC TGGATGAGAA CTATATCCCT TACTGTTTTT CAACGGACAT GCAGGAGGAG
AATATCGTCT TTGGTGGTGA AAAGAAGCTG AAAATTGCAA TCCAGGAGGC TTATGACCTC
TTTCATCCAA AGTCCATTGC CATCTTCTCG ACCTGTCCGG TTGGCCTGAT TGGTGATGAC
GTTCATGCCG CTTCACGTGA AATGAAGGAG AAACTGGGAG ACTGCAACGT TTTCGGTTTC
AGTTGCGAAG GGTACCGGGG TGTCAGCCAG TCGGCAGGCC ATCACATTGC CAACAACGGT
GTGTTCAAGC ACATGGTTGG CCGCAACAAC ACGCCGAGCG TGGGCAAGTT CAAGCTGAAC
CTGCTGGGTG AATACAACAT CGGCGGTGAC GCTTTTGAGA TTGAACGCAT TTTCAAGAAG
GTCGGCATTA CTCTTGTGGC CTCATTCAGT GGCAACTCGA CGGTCGGCCA GATTGAAAAC
GCTCACACTG CCGATCTGAA CGTGATCCTT TGTCACCGGT CGATCAACTA TATGGGTGAC
ATGATGGAGA CGAAGTACGG AATTCCGTGG ATGAAGATCA ACTTTGTCGG AGCAGAATCA
ACGGCAAAGT CGCTCCGCAA AATTGCTGAA TACTTTGGCG ACGAGGAGCT CAAGGCGAAG
GTTGAGGCTG TGATTGCCGA AGAGACACCA AAGGTGAAAG CGGTGATTGA GGAGATATTG
CCAAGGACAA AAGGCAAAAC TGCCATGCTC TTTGTCGGTG GATCACGTGC CCATCACTAC
CAGGATCTTT TTTCCGAGCT GGGCATGACG ACGGTAGCTG CAGGGTACGA GTTTGCTCAC
CGCGATGATT ACGAAGGGCG TGACGTACTG CCTAAAATCA AGATTGACGC CGACAGCAAG
AATATTGAGG AGCTGAAAGT GGTCGCAGAT CCCGACTTCT TCAACCCGAG AAAAACCGAA
GCGGAACTTG AAGCGCTGAA AGAAAAGGGG CTTGAAATCA ACGGTTATTC CGGAATGATG
AAGCAGATGA CCAGTAAATC GCTGGTTGTT GATGACCTCA GCCACTATGA GTCTGAAAAG
CTGATCGAGA TCTACAAGCC GGATATTTTC TGCGCCGGTA TCAAGGAGAA GTATGTGGTT
CAGAAGATGG GTATTCCGTT GAAACAGCTT CACAGCTACG ACTACGGTGG ACCTTACACT
GGCTTTGAAG GAGCGATAAA CTTCTACAGA GACATCGACC GTATGGTAAA CAATCCCGTT
TGGAAGCTGA TCAAGGCTCC ATGGGAAAAA GCCGGAAACG GTGCAGGACT TGCGGCCAGT
TACGTGACAC AGTAA
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| Protein sequence | MEANRVYPDP SQVREELIQK YPAKVAKKRA KSIIINDPEI IPEVQANVRT VPGIITQRGC
SYAGCKGVVL GPTRDIVNIV HGPIGCSFYA WLTRRNQTRP ETLLDENYIP YCFSTDMQEE
NIVFGGEKKL KIAIQEAYDL FHPKSIAIFS TCPVGLIGDD VHAASREMKE KLGDCNVFGF
SCEGYRGVSQ SAGHHIANNG VFKHMVGRNN TPSVGKFKLN LLGEYNIGGD AFEIERIFKK
VGITLVASFS GNSTVGQIEN AHTADLNVIL CHRSINYMGD MMETKYGIPW MKINFVGAES
TAKSLRKIAE YFGDEELKAK VEAVIAEETP KVKAVIEEIL PRTKGKTAML FVGGSRAHHY
QDLFSELGMT TVAAGYEFAH RDDYEGRDVL PKIKIDADSK NIEELKVVAD PDFFNPRKTE
AELEALKEKG LEINGYSGMM KQMTSKSLVV DDLSHYESEK LIEIYKPDIF CAGIKEKYVV
QKMGIPLKQL HSYDYGGPYT GFEGAINFYR DIDRMVNNPV WKLIKAPWEK AGNGAGLAAS
YVTQ
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