Gene Ppha_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1925 
Symbol 
ID6463185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2018816 
End bp2019136 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content36% 
IMG OID642728134 
Producthypothetical protein 
Protein accessionYP_002018764 
Protein GI194336970 
COG category[S] Function unknown 
COG ID[COG5304] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.577323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA AGACGAGCTA CGTTGATAAA GATGAACAAG AATTAGCGGA ATCACTTGAA 
ACGGAAAACT GGATTTCCGA TCTTGACGCT AAAGAAAAAA ATCAATATGA AAAGACTGCC
CTCTATAGCC TGAACACACA AAAACAAATC AACATAACAA TGAGTGAGCG CGATTTAATG
AAAATTCGTG CCAAGGCGGT CGAAGAAGGT ATTCCATATC AATCTTTTAT ATCAATGCTG
ATTCATAAGT ACAATGAAGG AAAACTATCA ATCACAAGCC CGACAAAAAA AGGAAAAAGA
CGCGGGATAA ACGCAGTTTG A
 
Protein sequence
MKKKTSYVDK DEQELAESLE TENWISDLDA KEKNQYEKTA LYSLNTQKQI NITMSERDLM 
KIRAKAVEEG IPYQSFISML IHKYNEGKLS ITSPTKKGKR RGINAV