| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1894 |
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| Symbol | |
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| ID | 6463255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1982073 |
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| End bp | 1983317 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728105 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_002018737 |
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| Protein GI | 194336943 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.107035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTGT CGGAGAGGAA GACTTTTTCG CTCAAGACAC TTCTTGGTTT TCTTGGGCCA
GGCTTTCTGG TAACGGTCGG CTTTGTTGAT CCCGGCAACT GGGCGACGAA TATTGAAGGG
GGCTCAAAAT TTGGTTATGA GCTGCTTTGG GTTGTTACGC TTGGTACGCT CATGCTGGTG
CTCATTCAGC ATATGGCGGC CAAACTCGGT ATTGCCACAG GAAAGTCTCT GGCGGTCAAT
ATCCGCGACC ATTTTCCTAA GCAGGTTTCC GCTTTTCTGG GTGTGAGTGT GGTGCTTGCC
TGCATTGCCA CTGATGTTGC CGAGCTGCTT GGAGGCGCTA TAGGCTTCAG CCTGCTGCTG
GGGATGCCGC TCTGGATGGG AGCCTTGTTG ACGCTGCTTC TGGAGCTTTT TCTGATTATC
AGCCAGCGCT ACCATCGGGT CGAAACCATC ATTGTGGGTT TCCTTGGCGT TATCACTCTT
TGCTATCTTG CCGAGCTTTT CATTGTGAGA CCGGATTGGT CCGGGGTAGC TTCCGGCCTG
GTTGTGCCGA GGGTTGGGCG GGAGAGCATT TATGTTGCTT TGGCGATTCT TGGAGCGCTG
GTGATGCCGC ACAATATTTT TCTCCATTCA AATGTCATTC ACAGCAGGGA GTGGGGGATA
TCGGAGGAGG AGAAGAGGGA GCTGCTTCGC TATGAAAAGA TGGATACCAT CCTCGCCATG
ACACTTGGGT GGGTGGTGAA CTCTTCGATG ATTATTGTTG CCGCTGCCGT TTTTTTCCAC
AATCATGTTC CCATCAACAG TATCGAGCAG GCATCGGCAA CACTGAAACC GCTTGCCGGG
CCACTTGCCG GACTGCTCTT TGCCGTTGCG CTTGTTTTTT CGGGAGTCGG CTCTTCCATC
ACCTCTTCCA TGGCGGAAGC TGATGTGATA ACAGGTTTTC TGGGCAGACC GGCGGATCCG
CGAACGATGT TCTATCGGGT TGCGGTCTTT GTTACCGCTA TTCCGGCTCT TCTCGTCATT
CTTTTCAGTC TTGATTCCTT TCGTATTCTG ATTTTGAGCC AGGTGGTGTT GAGCCTTCAG
CTTCCTTTTA CCCTTATCCC TCTTTTGATG CTCTGTCGTG ATCGCAAGGT GATGGGCAGT
TTCAGAAGCG GTACCGTTGA GTTTCTTGCA GCCACTCTCA TCTCTCTGCT TGTTATTGCT
CTCAACAGCT ATTTTCTTTA TACAACCATA ACCGGAGGAG ACTGA
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| Protein sequence | MKVSERKTFS LKTLLGFLGP GFLVTVGFVD PGNWATNIEG GSKFGYELLW VVTLGTLMLV
LIQHMAAKLG IATGKSLAVN IRDHFPKQVS AFLGVSVVLA CIATDVAELL GGAIGFSLLL
GMPLWMGALL TLLLELFLII SQRYHRVETI IVGFLGVITL CYLAELFIVR PDWSGVASGL
VVPRVGRESI YVALAILGAL VMPHNIFLHS NVIHSREWGI SEEEKRELLR YEKMDTILAM
TLGWVVNSSM IIVAAAVFFH NHVPINSIEQ ASATLKPLAG PLAGLLFAVA LVFSGVGSSI
TSSMAEADVI TGFLGRPADP RTMFYRVAVF VTAIPALLVI LFSLDSFRIL ILSQVVLSLQ
LPFTLIPLLM LCRDRKVMGS FRSGTVEFLA ATLISLLVIA LNSYFLYTTI TGGD
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