| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1886 |
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| Symbol | |
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| ID | 6463269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1974472 |
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| End bp | 1975128 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728097 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_002018729 |
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| Protein GI | 194336935 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.182336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACTG GAATTATCAA GGATGTTGGC CGGGTGGGGG GAGTGACACG GCGTCAGGGA
GGTCTGCGGC TCAGGGTGCA GTTCAGTAAT GCTGCAGAGT TTGCTGACCT TTCTGTTGAC
GAGAGTGTGA GCATCAACGG CGCTTGCCAG ACCGTTGTCG CTCTTGGAGA GGGGTGGTTT
GAGGTCGATA CTGTCGAGGA GACCCTCTCC AAAACAACGC TCGGCTCGCT CCATCATGGA
TCTCTCGTTA ACCTTGAACG GGCGGTTCGT CCCCAGGATC GCCTTGGCGG CCATTTTGTG
CTCGGCCATG TTGATTGTGC TGCCGTTGTC GAAAAAATCA GGGAGCTTGG TTCCAGCCGC
GAAATCTGGA TTGCATTTCC TGACGCTTTC AGCCCCTTTA TTGTCTCTGC CGGTTCGATA
ACGATTGACG GCATCAGCCT GACCGTTGCA AAGCTTGAGC CCCTGCTTTT TGCTGTGGCG
GTTATCCCGT ATACCTTTGC CCAAACCACC ATTAATGAGC TGAAATCAGG AAGCCGGGTG
AACCTTGAGT TCGATATTCT TGGCAAATAT GTGGCCCGCC AGCTTGGTCG CCCCCCCTCA
TCTGTCGCAG TCGCTTCGAA AATTGATGAG GGATGGCTCA GGGAGCAGGG ATTTTAA
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| Protein sequence | MFTGIIKDVG RVGGVTRRQG GLRLRVQFSN AAEFADLSVD ESVSINGACQ TVVALGEGWF
EVDTVEETLS KTTLGSLHHG SLVNLERAVR PQDRLGGHFV LGHVDCAAVV EKIRELGSSR
EIWIAFPDAF SPFIVSAGSI TIDGISLTVA KLEPLLFAVA VIPYTFAQTT INELKSGSRV
NLEFDILGKY VARQLGRPPS SVAVASKIDE GWLREQGF
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