| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1843 |
|---|
| Symbol | |
|---|
| ID | 6463387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1941309 |
|---|
| End bp | 1941587 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728055 |
|---|
| Product | Protein of unknown function DUF1778 |
|---|
| Protein accession | YP_002018689 |
|---|
| Protein GI | 194336895 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4453] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAGA TTCCGGTAGA AGGTAACGAG AGGTTGTCGC TGCGGATTGC TTCGGAAGAG
AAGTCTCTTT TGATGCGTGC TGCGGCAATA CAGAATACGC ATTTGACGGA GTTTGTCACC
CGCACCGTTG TTTCTGCGGC TCAAAAGGTA ATCGATCAGT ACGAACTGAT AGAGCTTACA
GGGAGGGATC GCGTACATGT CCTGAAATTG CTGGAAGATC CTCCGCTACC TAATGCAAAA
CTCATGGCAG CAGCACGTGC TTTGCCGAAG CGATCATGA
|
|---|
| Protein sequence | MPQIPVEGNE RLSLRIASEE KSLLMRAAAI QNTHLTEFVT RTVVSAAQKV IDQYELIELT
GRDRVHVLKL LEDPPLPNAK LMAAARALPK RS
|
|---|
| |