| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1809 |
|---|
| Symbol | |
|---|
| ID | 6463451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1913455 |
|---|
| End bp | 1914474 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642728024 |
|---|
| Product | Gas vesicle synthesis GvpLGvpF |
|---|
| Protein accession | YP_002018658 |
|---|
| Protein GI | 194336864 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.835829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGC AAGGTATTTA TATATATGGA TTTATTCCAA ATCACTATTT GACAGATATC
AAGACTATAT TGATTGAGTC AGGTATTTAT TCGATAGAGT ATGGCAGTAT TGCTGCCCTT
GTTTCTGATA CAATGGTAGA TGATATTGAG TATTTAAATA GAGAAGATTT AGCTTATTTA
CTTGTTGATC ATCAGAAAAA AATTGAGTTG ATTATGAGTA CAGGTTGCTC AACAATAATT
CCCATGCAGC TTGGTACAAT TGTAAATTCG GGTAATGATG TTATAAAAAT AGTTAAAAAT
GGATTACGTA TCATCAATAA AACTTTTGAT GATATAGCTG ATATTCAGGA GTTTGATCTG
GTGGTCATGT GGAATAATTT CCCTGATCTT ATTAAAAAAA TATCAGATAC TCCCCAGATC
AGGATTATGA AGGAAGAAAT TGCCAATAAA GGTAGTTATG ATCAGGCGGA CAGCATAAAT
ATCGGAAAAA TAATCAAAAA AAAGATTGAT GAAAAAAATA GTAAAGTCAA TCTTGATATT
ATGAATTCTT TATCTTCTTT ATGTATTTGT GTTAAGAAAC ATGAGTCGAT GAATGATGAA
ATGCCGTTAA ATTCAGCATT TCTAATAAAA AAGGATAAAG AAAACTCTTT TATTGAGATG
GTTAATCAAC TTGATATAAA ATATGAAAAT CTGCTTAGAT ATAAGATAGT TGGTCCGTTG
CCTTGTTATA GTTTTTATAC TCTTGAATCA AAACTTCTAA ATAAAAAAGA GATCGAAAAG
GCAGAAAAAA TTCTTGGTAT TGATGCCTAT AAATCAGAAT CAGATATAAA AAAGGCATAC
CGAGCAAAAG CAGCGCACGC CCATCCAGAT AAAAATAATA CTATTTCTGC AATTGATAAC
GATGATTTTA TAGAGATTAA CAAAGCATAT CAGATTTTAC TTGAATATTC AAGTGTCTTC
AAGGATTCTC CTGATCATAA GCCGGATGAA CCTTTTTATC TGGTTAAAAT AAAGAAATAA
|
|---|
| Protein sequence | MDRQGIYIYG FIPNHYLTDI KTILIESGIY SIEYGSIAAL VSDTMVDDIE YLNREDLAYL
LVDHQKKIEL IMSTGCSTII PMQLGTIVNS GNDVIKIVKN GLRIINKTFD DIADIQEFDL
VVMWNNFPDL IKKISDTPQI RIMKEEIANK GSYDQADSIN IGKIIKKKID EKNSKVNLDI
MNSLSSLCIC VKKHESMNDE MPLNSAFLIK KDKENSFIEM VNQLDIKYEN LLRYKIVGPL
PCYSFYTLES KLLNKKEIEK AEKILGIDAY KSESDIKKAY RAKAAHAHPD KNNTISAIDN
DDFIEINKAY QILLEYSSVF KDSPDHKPDE PFYLVKIKK
|
|---|
| |